| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3924 |
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| Symbol | atpC |
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| ID | 4254487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4687843 |
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| End bp | 4688271 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120572 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_736044 |
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| Protein GI | 113972251 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0244651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGCCA TGACAGTACA GCTTGATATA GTAAGCGCAG AGAGCAGCAT CTTCTCAGGT
CGCGTAGCTA GCCTACAAGT GACCGGTTCT GAAGGTGAGT TGGGCATCAT GCATGGCCAC
GCTCCACTGT TAAGCTATAT CAAACCTGGC ATGGCGCGCA TCGTCAAACA AGACGGCAGC
GAAGAAGTGT TTTATCTTTC TGGTGGTTTA CTGGAAGTAC AACCTTCTTC TGTTTCTGTG
TTGGCTGATG TGGTTATGCG TGCCAAAGAT ATTGATGAGC AGGCAGCATT AGAAGCCAAG
CGTCGTGCAG AAGCCCATAT GGCGACTGCG GGTGCGGACT TCAATTATGA CGCCGCTATG
GTTGAGTTAG CGAAAGCAAT GGCTCAATTA CGTGTTGTTG AAACCATCAA GAAAAACATT
GCCAGATAA
|
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| Protein sequence | MAAMTVQLDI VSAESSIFSG RVASLQVTGS EGELGIMHGH APLLSYIKPG MARIVKQDGS
EEVFYLSGGL LEVQPSSVSV LADVVMRAKD IDEQAALEAK RRAEAHMATA GADFNYDAAM
VELAKAMAQL RVVETIKKNI AR
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