| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3920 |
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| Symbol | |
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| ID | 4254483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4681040 |
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| End bp | 4682869 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120568 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase |
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| Protein accession | YP_736040 |
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| Protein GI | 113972247 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.121785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0336662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGAA TCGTTGGCGC CGTGGCGCAA AGGGATGTGG CCGAAATTCT GGTCGAAGGT
TTACGTCGTT TAGAATATCG TGGATATGAC TCCGCTGGTG TTGCCGTTAT CCACAATGGC
GAACTTAATC GTACTCGCCG TGTGGGTAAA GTGCAGGAGC TTTCTGCCGC ACTCGAAACC
GACCCGTTAG CGGGCGGCAC TGGTATTGCA CATACTCGTT GGGCTACCCA TGGAGAACCA
AGCGAGCGCA ATGCTCACCC ACATTTATCT GAAGGCGATA TTGCCGTGGT GCACAATGGC
ATTATCGAAA ACCATCATAA ACTGCGCGAA ATGCTAAAAG AGCTGGGCTA TCACTTCAGT
TCTGATACCG ACACCGAAGT GATTTGTCAT TTAGTTCATC ACGAATTAAA AACGCACGAC
ACCCTACTGG CCGCTGTGCA AGCCACGGTT AAACAACTTG AAGGCGCTTA TGGCACTGTG
GTTATCGACC GCCGCGATAG CGAGCGTATG GTCGTCGCGC GCTCAGGCAG CCCATTAGTG
ATTGGTTTTG GTTTAGGTGA AAACTTCGTT GCATCTGACC AATTGGCGCT GCTGCCTGTG
ACCCGTTCTT TCGCGTTTTT AGAAGAAGGT GACGTGGCAG AAGTGACTCG TCGCACCGTG
AGCATTTTCG ATGTGCATGG CAATAAAGTT GAGCGCGAAG TTAAAGAATC AGAAATCACC
CACGATGCCG GCGACAAAGG TGAATATCGC CACTATATGC TCAAAGAGAT TTATGAGCAG
CCATTGGCAT TGACGCGCAC TATCGAAGGT CGCATTGCTA ACAAGCAAGT GCTCGACACG
GCTTTTGGTG ATAATGCCGC AGAGTTTTTA AAAGATATTA AACACGTGCA AATCATTGCC
TGTGGTACTA GCTACCATGC AGGTATGGCG GCGCGTTATT GGTTAGAGGA TTGGGCTGGC
GTTTCATGTA ATGTCGAAAT CGCCTCTGAA TTCCGCTACC GCAAATCGCA TTTATTCCCT
AACAGCCTGT TGGTGACCAT TTCTCAATCC GGCGAAACCG CCGATACGCT GGCGGCGATG
CGCCTAGCCA AAGAAATGGG TTACAAGGCG ACGCTAACTA TCTGTAACGC ACCTGGCTCT
TCCTTAGTCC GTGAGTCTGA CATGGCATAC ATGATGAAAG CGGGTGCTGA GATTGGTGTG
GCCTCTACCA AAGCCTTTAC TGTGCAGTTG GCTGGTTTGT TAATGCTGAC GGCGGTGATC
GGTCGCCATA ATGGCATGTC GGAGCAAATG CAGGCGGAGA TCACTCAAAG CCTACAGTCT
ATGCCAGCCA AAGTGGAACA AGCATTGAGC TTAGATGATG CGATTGCTGA ATTGGCGGAA
GATTTTGCCG ACAAACACCA TGCCTTATTC CTTGGCCGTG GCGATCAGTA CCCGATTGCG
ATGGAAGGTG CGCTGAAACT TAAAGAGATC TCTTATATCC ATGCTGAGGC GTATGCCTCT
GGTGAGTTGA AACATGGCCC ACTGGCGTTG ATTGATGCCG ACATGCCCGT CATCGTGGTC
GCGCCAAACA ATGAACTGTT AGAAAAGCTG AAATCTAACG TTGAAGAAGT GCGTGCCCGT
GGTGGTTTAA TGTATGTCTT TGCCGATGTG GATGCTGAGT TTGAATCTGA CGAGACCATG
AAGGTTATCC CAGTTCCACA CTGCGATATA TTTATGGCAC CGCTGATTTA CACTATCCCA
TTACAGTTGC TGTCGTATCA CGTTGCCTTA ATTAAGGGCA CCGATGTGGA TCAACCGCGA
AACCTCGCTA AATCGGTGAC GGTGGAATAA
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| Protein sequence | MCGIVGAVAQ RDVAEILVEG LRRLEYRGYD SAGVAVIHNG ELNRTRRVGK VQELSAALET
DPLAGGTGIA HTRWATHGEP SERNAHPHLS EGDIAVVHNG IIENHHKLRE MLKELGYHFS
SDTDTEVICH LVHHELKTHD TLLAAVQATV KQLEGAYGTV VIDRRDSERM VVARSGSPLV
IGFGLGENFV ASDQLALLPV TRSFAFLEEG DVAEVTRRTV SIFDVHGNKV EREVKESEIT
HDAGDKGEYR HYMLKEIYEQ PLALTRTIEG RIANKQVLDT AFGDNAAEFL KDIKHVQIIA
CGTSYHAGMA ARYWLEDWAG VSCNVEIASE FRYRKSHLFP NSLLVTISQS GETADTLAAM
RLAKEMGYKA TLTICNAPGS SLVRESDMAY MMKAGAEIGV ASTKAFTVQL AGLLMLTAVI
GRHNGMSEQM QAEITQSLQS MPAKVEQALS LDDAIAELAE DFADKHHALF LGRGDQYPIA
MEGALKLKEI SYIHAEAYAS GELKHGPLAL IDADMPVIVV APNNELLEKL KSNVEEVRAR
GGLMYVFADV DAEFESDETM KVIPVPHCDI FMAPLIYTIP LQLLSYHVAL IKGTDVDQPR
NLAKSVTVE
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