| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3911 |
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| Symbol | |
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| ID | 4254474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4663820 |
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| End bp | 4665160 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638120556 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_736031 |
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| Protein GI | 113972238 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0495726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAA AATATAACTA CAGCGGTCCC CGTTACACTT CTTACCCAAC GGCGCTGGAG
TTCGATGATT CATTCACTGA ACAAAACCTG TTAACGGCGA TTGAAAGCAG TAAGAGCGAC
AAACTGTCGC TGTACATTCA CATCCCCTTC TGCGCCAAAC TTTGCTACTA CTGTGGCTGT
AATAAAGTTA TCACTCGCCA CGCCCACAAG GCCGATCAAT ATATCGAGTA TTTAAGCCAC
GAAATTATTA AGCGCGCTCC ACTGTTTAAG CACTACACAG TCACCCAAAT GCACTGGGGC
GGCGGCACTC CAACCTTCTT AAATCCCGAG CAAATTCTGA AGTTAACCGA CTTAATCAAG
GCTAATTTTA ACTTTGCCGC TGAAGGTGAG TTCTCTATCG AAGTTGACCC GCGTGAGATT
GAGCTTTCAA TGCTAGATAC CTTGAAAGAA GCGGGCTTTA ACCGCATTTC TATCGGGGTG
CAAGACTTCA ATAAAGAAGT ACAAGTCGCG GTTAACCGTG AGCAGGACGA GCAATTTATT
TTCGATTTAA TGGCCAAAGC CAAGGCCATG GGATTTGTCT CAACCAATAT CGACTTAATT
TACGGTCTGC CACATCAGAC ACCCGAAACA TTCGCCGCCA CCATGCAGCG CGTGTTAGAC
CTGTCGCCCG ATCGTCTATC CGTGTTCAAC TATGCTCATT TACCCGCGCG TTTTGCCGCG
CAGCGTAAGA TTAAAGATGA ACATTTACCT TCGCCAAAAC AAAAACTCGA GATGTTGCAT
CAAACGATCG AAACTTTAAC TGGCGCGGGT TATCAGTACA TCGGCATGGA CCACTTCGCG
AAGCCCGACG ATGAGCTGGC TAAGTTGCAA CGCGAAGGTA AATTGCATCG CAACTTCCAG
GGTTATACCA CCCAAGAAGA ATGCGACCTG CTCGGTCTGG GCGTGTCTTC AATCAGCCAA
ATCGGCGATT GTTATGCGCA AAATCAGAAG GACATTCGTC CTTACTACGA AGCCATCGAC
AAAGACGGCC ACGCGCTGTG GAAAGGCTGT AGTCTGAACC GTGACGACGA AATCCGCCGT
GTCGTGATCA AACAACTGAT CTGCCACTTC GATTTAGATA TGGCAAAAAT GGACGAAAAA
CTGGGTATTA AGTTTGAGGA ATACTTCGCC GAAGACTTAA AACTGCTGCA AACCTTTATC
GATGATAAGT TAGTCGACGT CACCGACAGA AAGATCACCA TCAGCCCCAC TGGCCGTCTG
TTGATCCGCA ATATCTGTAT GTGCTTCGAC CTTTACTACC GTCAAAAAGC GCGTCAACAA
CAGTTCTCCC GTGTGATCTA A
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| Protein sequence | MIEKYNYSGP RYTSYPTALE FDDSFTEQNL LTAIESSKSD KLSLYIHIPF CAKLCYYCGC
NKVITRHAHK ADQYIEYLSH EIIKRAPLFK HYTVTQMHWG GGTPTFLNPE QILKLTDLIK
ANFNFAAEGE FSIEVDPREI ELSMLDTLKE AGFNRISIGV QDFNKEVQVA VNREQDEQFI
FDLMAKAKAM GFVSTNIDLI YGLPHQTPET FAATMQRVLD LSPDRLSVFN YAHLPARFAA
QRKIKDEHLP SPKQKLEMLH QTIETLTGAG YQYIGMDHFA KPDDELAKLQ REGKLHRNFQ
GYTTQEECDL LGLGVSSISQ IGDCYAQNQK DIRPYYEAID KDGHALWKGC SLNRDDEIRR
VVIKQLICHF DLDMAKMDEK LGIKFEEYFA EDLKLLQTFI DDKLVDVTDR KITISPTGRL
LIRNICMCFD LYYRQKARQQ QFSRVI
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