Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3909 |
Symbol | |
ID | 4254472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4662436 |
End bp | 4662990 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638120554 |
Product | hypothetical protein |
Protein accession | YP_736029 |
Protein GI | 113972236 |
COG category | [S] Function unknown |
COG ID | [COG3078] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.307626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.259265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGTA GCAAGAAAAC ACGCAAGGGC GGCGATAATA GCCCTAAATT ACAGCCAAGA GTGAAAAAGC AGGACCGTGC AGAAGTCACA GGCAAGCGCG CCGAAAAAGG CAACAAGTCT GGCAGTCGTC ATAATGAGGC GCTGATCCAG GCTCAAGCAC CACAGAAAAA GGCTGCACAG AAGAAAGATC CTCGCCATGG CAGCAAAAAG CCTGTGGTAT TAACTTTGCC AACAGCCACT GAAAAGCCAG CCACACCAAA GGTTAAGCAA CCTAAGTTAA CTGACGAGCA AAAACTGTTG AAGCTGGAAG AAGATCCAAG ACTGAACCAG TTACTCGATA TGCTGGAAGA AGGCCGTAAC TTAAGCAATG ACGACCAACA ATGGTTAGAT CAGCAGCTGA ACAAGATTGA AGCCCTGATG ATTAAACTGG GTCTCAGCGA TGAGTTAGAA GATGAAGCAC CAGCGAAAAA ATCTAAAGTC GATTCAGATG ATGACCTGTT CGATCGCTTT GAATCGGGTG CCGACCTGCT AAAAGATTAT CAAGATAAGT TTTAA
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Protein sequence | MSRSKKTRKG GDNSPKLQPR VKKQDRAEVT GKRAEKGNKS GSRHNEALIQ AQAPQKKAAQ KKDPRHGSKK PVVLTLPTAT EKPATPKVKQ PKLTDEQKLL KLEEDPRLNQ LLDMLEEGRN LSNDDQQWLD QQLNKIEALM IKLGLSDELE DEAPAKKSKV DSDDDLFDRF ESGADLLKDY QDKF
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