Gene Shewmr4_3909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3909 
Symbol 
ID4254472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4662436 
End bp4662990 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content46% 
IMG OID638120554 
Producthypothetical protein 
Protein accessionYP_736029 
Protein GI113972236 
COG category[S] Function unknown 
COG ID[COG3078] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.307626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.259265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGTA GCAAGAAAAC ACGCAAGGGC GGCGATAATA GCCCTAAATT ACAGCCAAGA 
GTGAAAAAGC AGGACCGTGC AGAAGTCACA GGCAAGCGCG CCGAAAAAGG CAACAAGTCT
GGCAGTCGTC ATAATGAGGC GCTGATCCAG GCTCAAGCAC CACAGAAAAA GGCTGCACAG
AAGAAAGATC CTCGCCATGG CAGCAAAAAG CCTGTGGTAT TAACTTTGCC AACAGCCACT
GAAAAGCCAG CCACACCAAA GGTTAAGCAA CCTAAGTTAA CTGACGAGCA AAAACTGTTG
AAGCTGGAAG AAGATCCAAG ACTGAACCAG TTACTCGATA TGCTGGAAGA AGGCCGTAAC
TTAAGCAATG ACGACCAACA ATGGTTAGAT CAGCAGCTGA ACAAGATTGA AGCCCTGATG
ATTAAACTGG GTCTCAGCGA TGAGTTAGAA GATGAAGCAC CAGCGAAAAA ATCTAAAGTC
GATTCAGATG ATGACCTGTT CGATCGCTTT GAATCGGGTG CCGACCTGCT AAAAGATTAT
CAAGATAAGT TTTAA
 
Protein sequence
MSRSKKTRKG GDNSPKLQPR VKKQDRAEVT GKRAEKGNKS GSRHNEALIQ AQAPQKKAAQ 
KKDPRHGSKK PVVLTLPTAT EKPATPKVKQ PKLTDEQKLL KLEEDPRLNQ LLDMLEEGRN
LSNDDQQWLD QQLNKIEALM IKLGLSDELE DEAPAKKSKV DSDDDLFDRF ESGADLLKDY
QDKF