Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3908 |
Symbol | |
ID | 4254471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4661715 |
End bp | 4662353 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638120553 |
Product | hypothetical protein |
Protein accession | YP_736028 |
Protein GI | 113972235 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00391987 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.262705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGAT GTCCCCTTTG TCATAGCACT CAAACACAGT TGTTCTTACA GGACAAAAAG CGGTGTTTTT ATGTTTGCCA GACATGTGGA CTCACCTTTG CCGACGCAAA TAGTCACCTT CCTCCCGCGG CAGAAAAACA GCGTTATGGC CGCTCGCGGA TTGCCGCCAA ACAGCGCCAA CTCTCGCAAT TTATTTTACC GCTACTGACA CAAATACAAT TGCAGCAAAA AGGTAGCCTC ACAGGCTTAA ATTTTGGACG CGTGCTTGAT CAAACTAGTC TGGCGACTAT TGAATCGGCG GGACATACTT TTAAGCAATA TGACCCTTTC TTCGCGCCAG ACCACGAACC CCTAAAACAA GAGTATGATT TTATTTGCTG CTACCGAGTA TTTGAACACT TCCAGCACCC CAGCAGAGAA TGGAGCTTAC TGACCCGTTT ACTCAAGCCA GGCGGTTGGT TAGCGATTAG CACTCCCTTA TTAATTGATT TAGAAGGCTT TGCTAAGTGG CATTATAAAA ACAATCTCAC CCATGTGAGT TTTTACCAAA GACAAACTTT TGAATACTTG GCAAGCAATA GCGATTTTGA ACTATTATTT GCCGCAAAAG ACCTCGTTTT GATGCAAAAA ACATCATAA
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Protein sequence | MRRCPLCHST QTQLFLQDKK RCFYVCQTCG LTFADANSHL PPAAEKQRYG RSRIAAKQRQ LSQFILPLLT QIQLQQKGSL TGLNFGRVLD QTSLATIESA GHTFKQYDPF FAPDHEPLKQ EYDFICCYRV FEHFQHPSRE WSLLTRLLKP GGWLAISTPL LIDLEGFAKW HYKNNLTHVS FYQRQTFEYL ASNSDFELLF AAKDLVLMQK TS
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