| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3897 |
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| Symbol | |
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| ID | 4254460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4647895 |
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| End bp | 4648647 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120542 |
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| Product | 3-deoxy-D-manno-octulosonic-acid kinase |
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| Protein accession | YP_736017 |
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| Protein GI | 113972224 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC AAATCAAAAT CATAAATACC GCCGATGGCT ATATGGCACT TTGCCAAGAT
ACGCCTGAAG ACATCACTCC AGCTTGGTTT TCGGTGGATT TCTGGCGTGA AAAAGCCGCG
GTAGTGGGAT CATCCAAGGG ACGTTACACC ACTTGGTTTG TGGCCTTTAG CGAGCGCCAT
TGGGTGTTGC GACATTACTG GCGCGGCGGC CTGATGGAGA AATTCAGTAA GGATGCCTAC
TTCTATACCG GACTTGAAAA CACCCGCGCC ATGGGCGAAT TAAGGCTGCT CGATCTGCTC
TACCGTGAAC AATTTGCGGT GCCTAAGCCT ATTGCCGCCA ATATTGTGCG CGATGGCTTG
TTTTACCGTG CCGACATTAT TATCGAGCGA GTCGATGGCG CCGAAGACTT GGTCGCCAAG
TTAACCAAAG GCGCTATGAC TCCAGAGCAG TGGCAAGCAC TCGGCGCCAC CATTGCCCAA
TTTCATCGCC GCGGCGTTTA CCATGCCGAC TTAAACGCGA AAAATATTTT GTGGCAACCA
CAGCAAGCGG ATAGCGTACA AGAACGTTTC TATCTGATTG ATTTTGACCG GGGTGAGATC
AAAACGCCCC ATGCCCAATG GCATAAGGCG AACCTTGATA GGTTGCTACG CTCCTTCAAT
AAAGAACAAG GAAAACAGCC TACACTCGCC TTCACGCCCG CCGACTGGAC GGCTCTGCTC
GCGGGCTATC ACTCAGTTAT TCCCCAAGCC TAG
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| Protein sequence | MNAQIKIINT ADGYMALCQD TPEDITPAWF SVDFWREKAA VVGSSKGRYT TWFVAFSERH
WVLRHYWRGG LMEKFSKDAY FYTGLENTRA MGELRLLDLL YREQFAVPKP IAANIVRDGL
FYRADIIIER VDGAEDLVAK LTKGAMTPEQ WQALGATIAQ FHRRGVYHAD LNAKNILWQP
QQADSVQERF YLIDFDRGEI KTPHAQWHKA NLDRLLRSFN KEQGKQPTLA FTPADWTALL
AGYHSVIPQA
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