Gene Shewmr4_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3893 
Symbol 
ID4254456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4643596 
End bp4644486 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content31% 
IMG OID638120538 
Producthypothetical protein 
Protein accessionYP_736013 
Protein GI113972220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAC TGACTTTTGT TGTGCAAGGA CCTTACTTTC CGCATACAGA TAGAAATCAT 
ATTTCTTCTG ATGAATGCTT TAGAACTTTA CGAAAATATT TTCCTGATTC CAAAATAATA
TATTCAAGGT CAGATAACGT CGTGATCCCT CTTGAAGTAT TATCTTTGAT AGATCTTATA
GTTTGTCCTG ATGACGTAGG CCCTAATCAG GCCGGATGTA TCAACTCAAT TCCAAAATTT
GAGAATGTGA ATAGACAAAT ACATGGCGTT GTAGCCGGAT TGGAGTTAGT CGAATCTATT
TATTGTTGTA AAGTTAGATC TGATTTTAAA TTTATCAATA ATAACTTGAT AGATATTCTC
CCTTCTTTAT TGGTTAAAGC CAGTAGATTT AAAGGACGTT TGACCATATT GGATATATAC
AGTCGCACAG AGTACTTTAA ATTTGGTGGA AGGAGTTATG TTGATTATCA CTTAAGTGAC
TTTATATTTA TAGGATATTC TGAAGATGTT ATAAAGTATT GGAAAGGTGA GCTTTTTGGC
GATACAGACA AAAATTATCT TCATTATGAT GACTATAGGA CTGTCGAACA AATGTTGGGG
CGACGTTTTT ATAAGAACTA TTTTTCAAAT ATTGAAATAA ATTCTGAGCG AAATGTTAGT
CTTGAGGAGT GTTTGTTGGC AAAGTCAAGA ATTCAAGAAG ATTTTAATTT TTTGTCATTT
AAAAAGCTAG GCTTAGATAT TCCTCGTAGA TTTAAACGAC CTTATAGAGA TCAGGCATAC
TTTATCAATG GAAATATATT TGGGAGATTA GTATATAATC TATATTTTAT AAATAAATTT
ATTTTGAAAA AGTCTGGACT AAGAGATTTT TGGAATAAGT TAAAAAAATA A
 
Protein sequence
MKELTFVVQG PYFPHTDRNH ISSDECFRTL RKYFPDSKII YSRSDNVVIP LEVLSLIDLI 
VCPDDVGPNQ AGCINSIPKF ENVNRQIHGV VAGLELVESI YCCKVRSDFK FINNNLIDIL
PSLLVKASRF KGRLTILDIY SRTEYFKFGG RSYVDYHLSD FIFIGYSEDV IKYWKGELFG
DTDKNYLHYD DYRTVEQMLG RRFYKNYFSN IEINSERNVS LEECLLAKSR IQEDFNFLSF
KKLGLDIPRR FKRPYRDQAY FINGNIFGRL VYNLYFINKF ILKKSGLRDF WNKLKK