Gene Shewmr4_3883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3883 
Symbol 
ID4254446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4633604 
End bp4634263 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content50% 
IMG OID638120528 
Producthypothetical protein 
Protein accessionYP_736003 
Protein GI113972210 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAC TCTATAAGGC GATTTTTATC GTCTTTATTT TGCTGGTGTT AATGTTTGCG 
GCCCAGCAAG GGTTATTCGA GCATGTAACC GATAGCAATT GGGTGGCACA CTTTATTGCC
GCTCAAGGGG TCTATGCGCT GGCGGTATTG CTGATGGTTG GCGCCTTGTT TACCGCTGTC
GGTGGACCTA GGCAGGTGAT CGCCTTTGTA TTCGGCTTTG CCCTCGGTGG CATCTATGGT
GGCTTATTTT CCACCCTGGC GGCATTGCTG GGTTGTGTGC TGGCGTTTTA CACCGCGAGA
TTAACCATTC GAAACAGTCT GCAACGACGT TTTGGCAATC GTTTACAAAA GTTTGAGGCG
CTGATCATTC ATCGGACTTG GTTAAAAGTC TTAATGATCC GTCTGTTACC CGTGGGCAGT
AATCTGCTGA CGAATCTGTT TGCGGGGGCG ACACATATCC CCGCGGGGGG ATTTATGTTT
GGCAGCGTGC TGGGTTATTT GCCGCAGATG CTGATTTTCA GTTTTGCGGG CGCGGGCATA
GGCTTATCTG ATCATAACCA ACTGGGGATC AGTATCGGGC TGTTTATTAT CTCGAGTCTT
ATCGGCGCTT ACCTTTACCG TTCTAGCCTG CGTAAGCAGG TGGATGAATT GGAAAACTAA
 
Protein sequence
MKRLYKAIFI VFILLVLMFA AQQGLFEHVT DSNWVAHFIA AQGVYALAVL LMVGALFTAV 
GGPRQVIAFV FGFALGGIYG GLFSTLAALL GCVLAFYTAR LTIRNSLQRR FGNRLQKFEA
LIIHRTWLKV LMIRLLPVGS NLLTNLFAGA THIPAGGFMF GSVLGYLPQM LIFSFAGAGI
GLSDHNQLGI SIGLFIISSL IGAYLYRSSL RKQVDELEN