| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3881 |
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| Symbol | |
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| ID | 4254444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4630989 |
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| End bp | 4631804 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638120526 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_736001 |
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| Protein GI | 113972208 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAT TACCAGAAGT CGAAGTCACC CGTCAGGGCA TAGCCCCACA TCTTGTCGAA
CAAACCGTGG TTGACCTCGT AATCCGTAAC GCCTCACTGC GTTGGCCCGT TCCCGAACTT
GCCAAACAGA TCATCGGCCA AACCATACGC CAAGTGCGTC GCCGCGCTAA ATATCTGTTA
ATCGATACCG ATGCTGGCAC CAGCATAGTG CATTTGGGGA TGTCGGGCAG CTTGCGGATC
CTGCCCCATG ACACGCCAGT GGAGAAGCAC GACCATATCG ATCTTGTCCT CGCCAATGGC
CGAATTCTGC GATTTAACGA TCCTAGACGT TTTGGCGCTT GGTTATGGTG CCAATTGCCA
GAGGAAGCCC ATCCGCTACT GGAAAAACTC GGGCCAGAAC CTTTGACCGA CGCCTTTAAC
GTCAATCAGT TAGCTGCCGC ACTGGCGGGC AAGAAGAAGG CCATCAAACT CTGCCTGATG
GACAACCATA TTGTGGTGGG TGTGGGAAAT ATTTACGCCA ACGAAGCACT GTTTGCCGCA
GGAATACACC CCGAGGCGGA GGCCGGCAAG ATAGATATTG AACGCTTAAC GGTACTGGTT
GCCGAGGTCA AACAAATCCT CGCCCACGCC ATCAAACAGG GCGGTACTAC GCTTAAAGAC
TTCACCAATG CCGAGGGTAA ACCCGGCTAT TTCGCGCAAA AGCTGCATGT TTACGGCCGC
GGCGGCGAAA CCTGCACTCA GTGCGGCAAT CTACTCAGCG AAATCCGCCT AGGTCAACGC
ACCACAGTAT TTTGCGGCAT CTGCCAGACG CGTTAA
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| Protein sequence | MPELPEVEVT RQGIAPHLVE QTVVDLVIRN ASLRWPVPEL AKQIIGQTIR QVRRRAKYLL
IDTDAGTSIV HLGMSGSLRI LPHDTPVEKH DHIDLVLANG RILRFNDPRR FGAWLWCQLP
EEAHPLLEKL GPEPLTDAFN VNQLAAALAG KKKAIKLCLM DNHIVVGVGN IYANEALFAA
GIHPEAEAGK IDIERLTVLV AEVKQILAHA IKQGGTTLKD FTNAEGKPGY FAQKLHVYGR
GGETCTQCGN LLSEIRLGQR TTVFCGICQT R
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