Gene Shewmr4_3880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3880 
Symbol 
ID4254443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4630509 
End bp4630964 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content52% 
IMG OID638120525 
Producthypothetical protein 
Protein accessionYP_736000 
Protein GI113972207 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTA CTCGTAAACA GTGGAATAAC ATCATTATTC TTGCCTGCAT TTTTATCATT 
GCGGTGCTGA CGTTTATGGA CAAGAAAACC CATAATGTGC CGAGTGATGC CCAACTGTTA
TTTGATGACA ATGCGCCGCT GGCACAGTTG CAGCTAGATG GTGTGTGGCT GCATAAACAA
GCCTCAGGTT GGGAGTGCGA TCCGCTGGTG CTCAACTGCG CTCAATGGGC CAAGGCTTGG
CAAGGCCTAA AAGTCTCGCC CCTCAGCGAG GCACCACAAC CCACAGGCAA ACCGCAGGAA
CTGGTGATCC AAATTGCCGA GATCCGCCAA TCGCAACGTT GGATTTATTT CCCCGAGGAC
GGTGTGCTCA AATCACCCGC TGGCAACTGG TATTTAGTGC CCCCCAGCCT AAGGGCCGAT
TTACAGCCTA TTCTCGATGC CAAATCCACC AGCTAA
 
Protein sequence
MALTRKQWNN IIILACIFII AVLTFMDKKT HNVPSDAQLL FDDNAPLAQL QLDGVWLHKQ 
ASGWECDPLV LNCAQWAKAW QGLKVSPLSE APQPTGKPQE LVIQIAEIRQ SQRWIYFPED
GVLKSPAGNW YLVPPSLRAD LQPILDAKST S