| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3872 |
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| Symbol | |
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| ID | 4254435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4620984 |
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| End bp | 4623113 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120517 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_735992 |
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| Protein GI | 113972199 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000275597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTTTT TTACTCACTT TTTTGGTGTC AGTTGGCAGC AAATGCAGGC CAAAGTGCGT
TATCGCATTC TGATCCTCAC CTTGCTGCCG ATTTTGCTCA CCTTGGTGAG TTTAGTGTTT
ATCACTATTT ACTGGAATAT CAGTTACACA GGCAAGCAAC TGTTTATGAA AGTAAAAGCC
GATCTGGCTG TGGCTGAAAA TACTCTGCAA CAGGTGCAAG TTCGTCAGGA GAAACAGCTC
GAGAGAGTCA TGACCTCATG GACTTTTCAG AATGATTTTC GGCCCATTCT CACTGGCGAG
TTGGCCCACA GGGCGAGTAT AGATGCCTTT CTAAATGAGC AAAAAAAGCA ACTCGATCTG
GATTTTCTAA GGCTTGTCAG TGTGGCCGAG GCCGCGTCAG ACCCGGATTT GCGACAAATT
TTACCGAAAA TGGGTGGTCT TTTACCCTAT TCGGGGCTGA TGGTGTTATC ACCTGAACGT
TTGGCGCGGG TTGATCCGGA TTTAGCCCAA AGGGCGGCGA TTCCCTTACT GGCGACATTG
CGGGCGCAAA GCCCGAATAA ACAAGTGGAA GACCGTGGTC TACTGAGCCG CAGTTTGCTG
CCGATCCCCG ATTTTGAGGG CAAAGTGGCT TGGTATCTCG ATGGCGGCGT GCTGTTTAAT
CGGGATACGC GTATCGTCGA CCATATCCGC GACCTCGTGT ACGACAAGGG CACGCTGCCG
GAGCGTTCCA TCGGTACTGT GACCATTTTC CTCGACAATA TTCGTGTCTC AACCAACGTA
CCTTTGCATT TTTTCCCACA GTCGAATGAA CCCCAAGGGC GGGCGCTCGG CAGTTTAGTG
TCGGAGGAAG TGCGCGAAAA AGTGCTGAAT CACGGTGAGT TATGGGTCGA TCGCGCCTTT
GTGTTTAACG ATTGGTTTAT TTCCGCCTAC GCGCCCTTAG AGGATATCCG TGGGCAACGT
GTCGGTATGA TCTATACCGG ATTTTCAGAA TCGCCCTTTA TTCATAACTA CCTGCTTAAT
ATCATCGAGT TAGGCACCAT TCTGATGCTG GTGCTGCTGA TCTCCGGCTT GTTGGTGTAC
CGCGGCGCTT ACAGCTTGTT GCAACCGATT GAGCGGATTC ACCATGTGGT GCAAGCGGTA
CAGTCAGGGC GCAATGTGCG TATCGGCGCC TTAGGGCTGG ATAGGGATAA CGAGCTGGCG
AATCTTGCCG AGCAGTTCGA CCGTATGCTC GACCTATTGC AGCGGCGTAA TGCTCAAATC
CAAGCCGCGG CCGAACAACT CGAGATGAAG GTCGAGGAGC GGACTCGTAG TTTGCAAGAT
AAGACCTTAG AGTTGCAGCG TAACGTGGCG CTGCTCAATG AGACTCGCCA GCAGTTAGTG
ACCAATGAAA AGTTAACCGC GCTGGGTGAG TTAACCGCAG GGATTGCCCA TGAGATCAAT
AATCCAACGG CGGTGATCCT CGGCAATATG GAGCTGTTGC GTTACGAGCT TGGTGACAAT
GCCGAAGTAG TAAAAGAAGA AATCGATCTG GTTATTCAAC AGGTTGGTCG TATTAGCACT
ATTATCCGCA GCCTGTTGCA ATACAGTCGT CCTGGTGAGT TTAACGCTCC CTTAGAGATG
CACCCCATTA CGCCTATCAT CGAGGAAATG CTGGTATTAG TACGGCACTC GATTCAAAAA
CAAGAAGTTG TACTGATAAC CGAACTGAAC GCTAGTTGTC CCGTGCAGGT TAACCGCCCG
CAGTTGTTGC AAGTGCTGAT TAACCTTGTG GTTAACGCAG CCCATGCGAT GGACGGTAAG
GGCAGGATTT GGATTCGCAC CTATGATTGG CTGCAGCAAG ATATGCCTAT TGGGGTGAAA
ATTGAGGTTG AGGACGAAGG CTCTGGGATT GCGCCTGAGC AGCTAGGGCG GATTTTTGAT
CCCTTCTACA CCACGCGTAA GGACGGTACT GGCCTTGGAT TATCCTTAAG TTACGGCATT
ATCAAGCGTA TCGGCGGCAC CATAGAAGTG AGTTCTGTAC TGGGTAAGGG GTCTATCTTC
ACCATTGGTT TGTACCATGA GGCGAAGGAA GATCAGCAAA ATAACCCCTA CGATGGTTTA
CATTTTTCCG GTCAACCCAC CGAGAGGTGA
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| Protein sequence | MSFFTHFFGV SWQQMQAKVR YRILILTLLP ILLTLVSLVF ITIYWNISYT GKQLFMKVKA
DLAVAENTLQ QVQVRQEKQL ERVMTSWTFQ NDFRPILTGE LAHRASIDAF LNEQKKQLDL
DFLRLVSVAE AASDPDLRQI LPKMGGLLPY SGLMVLSPER LARVDPDLAQ RAAIPLLATL
RAQSPNKQVE DRGLLSRSLL PIPDFEGKVA WYLDGGVLFN RDTRIVDHIR DLVYDKGTLP
ERSIGTVTIF LDNIRVSTNV PLHFFPQSNE PQGRALGSLV SEEVREKVLN HGELWVDRAF
VFNDWFISAY APLEDIRGQR VGMIYTGFSE SPFIHNYLLN IIELGTILML VLLISGLLVY
RGAYSLLQPI ERIHHVVQAV QSGRNVRIGA LGLDRDNELA NLAEQFDRML DLLQRRNAQI
QAAAEQLEMK VEERTRSLQD KTLELQRNVA LLNETRQQLV TNEKLTALGE LTAGIAHEIN
NPTAVILGNM ELLRYELGDN AEVVKEEIDL VIQQVGRIST IIRSLLQYSR PGEFNAPLEM
HPITPIIEEM LVLVRHSIQK QEVVLITELN ASCPVQVNRP QLLQVLINLV VNAAHAMDGK
GRIWIRTYDW LQQDMPIGVK IEVEDEGSGI APEQLGRIFD PFYTTRKDGT GLGLSLSYGI
IKRIGGTIEV SSVLGKGSIF TIGLYHEAKE DQQNNPYDGL HFSGQPTER
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