| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3868 |
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| Symbol | |
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| ID | 4254431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4617154 |
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| End bp | 4618512 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120513 |
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| Product | isochorismate synthases |
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| Protein accession | YP_735988 |
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| Protein GI | 113972195 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.172754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCGCTC ACGCCCTGTC TGAAGACCTT AAGTCTCTCA TCGACAAACT CATTCAATTG
AAGCAGGTTC CACCGACGGA GCCGATAGTG CAGTTATCCT TAACAACTGT TTCTATCCCT
TTGATTTCAT GGCTGGCATC CCAAAACCAA TACCCGCGCA TCTACTGGCA TGGACGTGAC
AAGGTTGAAG AAGTGGCGGC GATTGGCGCC TGTAAAGACT TTAAGTTTGA AACTGGCGTC
GATGATGGCA CCTTAGCGGA AATTTATCAG CAGCAACGCG CCTTAACCAC AAATCCCGAG
ATCCGTTACT ACGGCGGCGT GGCGTTTGAC CGCAGCATAG AGTCCTGGCC TGAGTTTGGT
AATAGTCGCT TTGTGCTACC GCGTATCGAA TTTAGACGCA GCGCGAACCA GTTCAGTTTG
CGGGTCAATC TGAACTTTGT CGATAGGCAT CTCGAAGAGG AAATCGACCT CGCCATTGCC
GCGATAGAAG CCGTGCTGCC CGCTCGTCCG CTCGCACCGC CCAATAAACT TGCGCTGTTG
AGCCGCACCG ATATTCCCGA TTTTCCGCGC TGGAAGACCT TAATCGAGCA AGTGGTTGAA
CCTAAGTTTA ATCAAGATAC GCCCAAGGTA GTGCTGTCAC GCCATACTCA GCTCGAGGTC
AATGAACAAG TCGATCCTTG GATGGTGTTA GCCTGCTGGC AGGGGCGTAA TCCGAACAGT
TTCCAATTTG GCTTCCAATT TAGCCCCGAG CGCACTTATA TCTCCTGCTC GCCAGAGCGG
TTATTTCGCC GTCGTCAGCA GGAACTGTTT ACCGAGGCGC TTGCCGGCAC CACAGTACGT
GGCTTAAACC AAGAAGAAGA CACGGCGCTG GCCAACGCGC TGCTCGAAGA CAACAAAAAC
AGCATAGAGA ATCAGCTAGT TCGCCGCCAT ATCGTCAGTA TGCTCTCCCC TTTGAGCCAG
CATGTGGGCG CCGAAGAAGC CGCGACGATT TTTAAGTTAA ACCATATTCA GCATCTACAC
CGTGCCATTC GCGCCGAATT AAAGCCGGGA GTGAATGACT TCCAGTTGTT ACAGGCGCTA
CACCCAACTC CTGCGGTAGG CGGCCTTCCC CGCGAGTCGG CCATGCGCTT TATTCGCGAA
CGCGAAGGCT ACATGCGCGG CTGGTACGCC GGTGCCTGTG GTTATTTTAA TAAGTATGAG
AGTGAATTTT CGGTGGCGAT TCGTAGCGCC TTGATTGAAC CCGGCAAGAT CAACCTATTT
GCCGGTGCGG GCATTATTGC GGGCTCAGAT CCCGAGGCGG AATGGCAAGA ACTGGAAAAT
AAACTGGCGA CGATTATGTC GATTCTCATT GAGCTATAA
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| Protein sequence | MPAHALSEDL KSLIDKLIQL KQVPPTEPIV QLSLTTVSIP LISWLASQNQ YPRIYWHGRD
KVEEVAAIGA CKDFKFETGV DDGTLAEIYQ QQRALTTNPE IRYYGGVAFD RSIESWPEFG
NSRFVLPRIE FRRSANQFSL RVNLNFVDRH LEEEIDLAIA AIEAVLPARP LAPPNKLALL
SRTDIPDFPR WKTLIEQVVE PKFNQDTPKV VLSRHTQLEV NEQVDPWMVL ACWQGRNPNS
FQFGFQFSPE RTYISCSPER LFRRRQQELF TEALAGTTVR GLNQEEDTAL ANALLEDNKN
SIENQLVRRH IVSMLSPLSQ HVGAEEAATI FKLNHIQHLH RAIRAELKPG VNDFQLLQAL
HPTPAVGGLP RESAMRFIRE REGYMRGWYA GACGYFNKYE SEFSVAIRSA LIEPGKINLF
AGAGIIAGSD PEAEWQELEN KLATIMSILI EL
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