| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3858 |
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| Symbol | |
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| ID | 4254421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4605425 |
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| End bp | 4608478 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120503 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_735978 |
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| Protein GI | 113972185 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACCT CTGTGATCCG TTTTTCGCTC ACTCAGCGAC TCTTTGTGCT GATTGTGGCG
CTGATCCTCA TGTTGGCTGG CGCACGCGCT TGGTTTGCCA TTCCCTTGGA TGCCTTTCCG
GATATTTCCC CAACCCAAGT GAAGATTATC CTCAAGGCTC CCGGCATGAC GCCGGAGGAA
ATCGAGGCCC AGATTACCGT CCCGATTGAA ACCGAGCTTT TGGGTATTCC GAAGCAATCG
ATTCTTCGCT CGACCACTAA GTACGCCATT AGCGATATCA CCCTCGATTT TGAAGAGGGC
ACGGATATCT ATTGGGCGCG CCAACAGGTG AGCGAGCGCC TCTCGGCGGT CTGGGACAGT
TTTCCCGAAG GCGTGAGTGG CGGTGTGGCG CCCATGAGTA CGCCACTCAG TGAAATCTTT
ATGTTTTCAC TCGAAAACCC CAATCTTTCC CTGCTGGAGC GACGTCAATT ACTCGAGTGG
GAAATTCGGC CGCTGCTGCG CACAGTACCC GGCGTTGCCG ATGTGAATAT CCTCGGCGGT
TATGCCAAGA GTTTTAGTAT CAGCCCCAAT CCTGCGGCTA TGGCGGCTGC GGGTGTGAGC
TTTGCCGCGC TGCGGCAGGC GATTGTGGAG AATAATCACA ACGAAGGTGC AGGTAAGCTC
ACCATAGGTA CAGACACCAT CATAGTGCGC TCCGAGGGAC GCATCGATGA TATCGACGAG
CTTAAACAGC TAGTGATCAA AGCCGATAAT GCCAAGGTCT ACCGCTTGCA GGATCTCGCT
GATATCCAGA TTGGCCACCT TGCGCGCTAC GGCGCCGTGA CAAAGGATGG TAACGAAACC
GCCGAAGCCT TAATCATTGC CCTCAAAGAC GCCAATACGG CACAAGTGGT TAACAACATT
AAGGAAAAGC TGGCGCAAAT CAGCCTAACT CTCCCCGAAG GCAGCCAGAT AAACACCTTT
TACGACCGCG CTAACCTGAT CAACACCGCT ATTGAGACTA TTTCCAATGC GCTATTCGAG
GCCGTAGTGC TGGTCATCGT ATTGCTGGCG CTGTTTTTAG GGAATGTGCG CGCCGCGTTA
GTGGTGTCAC TATCGCTGCC ACTGGCCGCA CTGTTCACCT TTTTGATGAT GGATCACTTC
AATCTTTCAG CTAACTTGAT GAGCCTCGGT GGCCTCGTTA TCGCCATCGG CATGTTGGTG
GACTCCTCCG TGGTAGTGGT TGAAAACATG GTGAATTTAA TCGCCACTAA ACAGCGTTTG
CCGCGTTTGC ACTTGATCTT TCGCGCCACC AAAGACGTCG CCATTCCCGT AGTATCGGGC
ACGGTTATCG TCATCATAGT GTTCTCACCA CTGCTCACCC TCAGTGGTTT AGAAGGCAAA
CTCTTCACCC CAGTTGCTAT TACCATAGTG TTTGCCATGC TGTCGGCGCT GGTGTTATCG
CTGACCGTGA TCCCCGTGAT TGCCTCGTAC CTAGTCAACG AAAAGGCCGC GAAGGAACCT
AAGGCCATCG AAAAGCTTAA GCATCTTTAT CTTGGCAGCC TAAAGGCCTG CTTTGGTTGG
CAAAAACCTT TTATGCTCAC TGCCTTTAGC TTGCTGATCG TCAGTCTCGG CCTGTTTAGT
CTGGTGGGGA AAACCTTTAT GCCGACCTTA GATGAGGGCG ATATCATTCT CCAGTTAGAG
AAATCCCCTT CGATTTCCCT CGACGCCTCC ATCGCTATCG ATAAACAGAT CCAGCAAACC
CTGCTAAGCC AAATCCCCGA AATTAAGCAG ATGGTGGCGC GCACCGGCGC CGATGAGATA
GGTTTAGATC CCATGGGACT GAACGAAACC GATGTATTTT TAGAGCTGGC GCCCCGCAGC
GAATGGCGTT TTGCGACCAA AGAGCAGCTT ATCGATGCCA TCCGCACTGT GCTGCTCAAA
TATCCCGGCG TGAACTTTAA CTTTACGCAA CCGATACAGA TGCGCGTCTC CGAAATGCTC
ACAGGCAGTA TTGGGGATGT CGCGATTAAA GTATTCGGGA ATGATATCGA GACCTTAGGC
AAACTCACCG GTGAGATAGA ACAACTGGTC ACCGCCACTC AGGGCAGCGT CGACGTTAAG
ATGGCGATGA TTGAAGGCAG CCCCTTTATC AATCTCACCT TAGATAACGA GCTCGCCCGT
GGGTTTGGGA TGAGCACTAT GGAGTTTGCC CGCTACCTCA AGAGCCAACT CGAAGGCGTG
GTCGTCACCG AAGTGCTGCA AGGGAAGAAG CGCACGCCCG TGCTTATCGC TAATAATCAG
GCGCAGATCA GCAACATTAA CGAACTGCAA AATCAGCTAT TGGTGATGCC AGATCATTCT
CTAAAACGCC TAAGCGATGT GGCTGTTTTG AGCTATAAAC AAGGCCCTAT CCTGATCGAG
CGGGAACAGG GAAATCGCTT TTCGGTGATC ACCACCAACG TCCAAGGGCG GGATATTGTG
GGCTTTGTGG AGGAGCTTAA CAGCAAAATC ACCAAGGAAA TCAAACTGCC CAGCGGCTAT
AGCGTTAGCT TCGGTGGCGA GTTTGAAAAC CAGCAGCGCG CCACCAGCAA TTTGTTGCTG
GTGATCCCTA TAGCTATCGC ACTGATCACT TTGATTTTAT TCACCACCTT CGGCTCGCTA
GCAAAATCGG GATTAATCCT CGCTAACGTC CCGTTCGCTA TGATGGGCGG TATCGTCAGC
TTGTATCTCT CAGGGGAATA CCTCTCGGTA CCCGCCTCGG TAGGTTTTAT CGCCCTGCTA
GGTGTCGCCG TGCTTAACGG CGTGGTGATG GTCAGTTATT ACGAACAAAC CAAATACTTA
TTCGGTAGCC TCAGGGAACG AGTCGAACAG GGTGCCGCCC GGCGACTCAG GCCCATTCTG
ATGACAGCCA CCACCGCCAT GTTTGGTTTG ATCCCCTTAG TGTTCGCCTC GGGCCCCGGT
GCTGAAATCC AAAAACCCTT GGCCATTGTG GTGATCGGTG GATTACTCAC ATCGACCATT
ACGACCCTGT ATTTACTGCC CATGTTGTAT TTTTGGCTGG AGAAACGCCG ATGA
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| Protein sequence | MLTSVIRFSL TQRLFVLIVA LILMLAGARA WFAIPLDAFP DISPTQVKII LKAPGMTPEE
IEAQITVPIE TELLGIPKQS ILRSTTKYAI SDITLDFEEG TDIYWARQQV SERLSAVWDS
FPEGVSGGVA PMSTPLSEIF MFSLENPNLS LLERRQLLEW EIRPLLRTVP GVADVNILGG
YAKSFSISPN PAAMAAAGVS FAALRQAIVE NNHNEGAGKL TIGTDTIIVR SEGRIDDIDE
LKQLVIKADN AKVYRLQDLA DIQIGHLARY GAVTKDGNET AEALIIALKD ANTAQVVNNI
KEKLAQISLT LPEGSQINTF YDRANLINTA IETISNALFE AVVLVIVLLA LFLGNVRAAL
VVSLSLPLAA LFTFLMMDHF NLSANLMSLG GLVIAIGMLV DSSVVVVENM VNLIATKQRL
PRLHLIFRAT KDVAIPVVSG TVIVIIVFSP LLTLSGLEGK LFTPVAITIV FAMLSALVLS
LTVIPVIASY LVNEKAAKEP KAIEKLKHLY LGSLKACFGW QKPFMLTAFS LLIVSLGLFS
LVGKTFMPTL DEGDIILQLE KSPSISLDAS IAIDKQIQQT LLSQIPEIKQ MVARTGADEI
GLDPMGLNET DVFLELAPRS EWRFATKEQL IDAIRTVLLK YPGVNFNFTQ PIQMRVSEML
TGSIGDVAIK VFGNDIETLG KLTGEIEQLV TATQGSVDVK MAMIEGSPFI NLTLDNELAR
GFGMSTMEFA RYLKSQLEGV VVTEVLQGKK RTPVLIANNQ AQISNINELQ NQLLVMPDHS
LKRLSDVAVL SYKQGPILIE REQGNRFSVI TTNVQGRDIV GFVEELNSKI TKEIKLPSGY
SVSFGGEFEN QQRATSNLLL VIPIAIALIT LILFTTFGSL AKSGLILANV PFAMMGGIVS
LYLSGEYLSV PASVGFIALL GVAVLNGVVM VSYYEQTKYL FGSLRERVEQ GAARRLRPIL
MTATTAMFGL IPLVFASGPG AEIQKPLAIV VIGGLLTSTI TTLYLLPMLY FWLEKRR
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