Gene Shewmr4_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3848 
Symbol 
ID4254411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4595441 
End bp4596547 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content50% 
IMG OID638120493 
Productgamma-glutamyl kinase 
Protein accessionYP_735968 
Protein GI113972175 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACT CTCCCCGTAA ACGTATCGTC GTCAAAGTGG GGAGCGCCTT AATCGCGCCC 
CACAAGCAAG GTTGCAGTAG CCATTATCTC TTGGGTATCG CGCAGTTTAT TACTTACTGT
CGCGTCCAAG GTATCCAAGT GGTACTGGTT TCATCCGGTT CGGTTGCCGC AGGTTGGCAT
CATTTTGAGG GCCAAACTCA ACCGAGTGTC ACAGTGAAAA AGGCCATGGC AGCCGCGGGG
CAGGCGGATA TGATGGCGAC GTGGAATAAG CTATTTGATT TTCCTACCGC CCAACTGCTG
CTGACCCATG GCGATTTACG TAATCGCGAG CGTTATATCA GTATTCGAGA CACGATTTTT
AGCCTGCTCG AACACGGTTT AATGCCGATC ATCAATGAGA ATGATGCCGT TACCGCCGAC
AAACTTAAGG TTGGCGATAA CGATAATCTC TCGGCCATGG TGGCAGCAGC GGCCGATGCC
GACACCTTAG TGATTTGCTC GGATGTGGAT GGACTCTATG ATCAAAATCC CCACGAACAT
CCCAATGCCA AGTTGATAAA GCAAGTCACT GAAATCAATG CCGATATCTA TGCGATGGCG
GGAGGCGCCA GCAGCGATGT TGGCACTGGA GGCATGCGCA CTAAGATCCA AGCCGCCGAG
AAAGCCATCT CCCACGGCAT TGAGACCTTT ATTATCAATG GCTTTAATGC CGACTCCTTT
AGCCAACTGC TAAAGGGGCA AAATCCGGGC ACCCTCTTTA CCCCCTACGA AAAACCGATG
CAGGAGCATT TGCATTGGAT GACCCACACC TCGCAAGCGC AGGGCGAAGT GATCGTCGAG
GATGATTTTG ACCTCGCACT CGATCAGCAC AGCGAGCAAT TAACCAGCGA TGATGTGGTT
GAAGTCAAAG GGGATTTCTC TGTGGGCGAC ACCATTCTGG TGCGTAAAGG CGATGGCACT
AAGTTGGCGA AAGCCAAATC TAACTACAGC AGTTGCCTAC TGAGTTTTAT TACCGAGCAG
GATGATCAGG CATTTGCCAG TGAATTCCAG CAAAAAACCG GCCCCATCAT TTCCGATAAG
AATATCGCCA TTCTTAAATC CATTTGA
 
Protein sequence
MTDSPRKRIV VKVGSALIAP HKQGCSSHYL LGIAQFITYC RVQGIQVVLV SSGSVAAGWH 
HFEGQTQPSV TVKKAMAAAG QADMMATWNK LFDFPTAQLL LTHGDLRNRE RYISIRDTIF
SLLEHGLMPI INENDAVTAD KLKVGDNDNL SAMVAAAADA DTLVICSDVD GLYDQNPHEH
PNAKLIKQVT EINADIYAMA GGASSDVGTG GMRTKIQAAE KAISHGIETF IINGFNADSF
SQLLKGQNPG TLFTPYEKPM QEHLHWMTHT SQAQGEVIVE DDFDLALDQH SEQLTSDDVV
EVKGDFSVGD TILVRKGDGT KLAKAKSNYS SCLLSFITEQ DDQAFASEFQ QKTGPIISDK
NIAILKSI