| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3847 |
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| Symbol | |
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| ID | 4254410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4593935 |
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| End bp | 4595431 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120492 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_735967 |
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| Protein GI | 113972174 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCCC TCTCTTACAT TTCATTGGCA ATTTACTTTA TTGCCATGCT CGCCATTGGT
TTGTTCGCCT ATCGCAAGTC GACCGATGAT GTCTCTGGCT ATATTTTGGG TGGCCGCCAA
GTCAGCCCGC AAGTCACGGC TCTCTCGGCC GGTGCCTCGG ATATGAGTGG CTGGATGCTG
ATGGGCCTTC CCGGCGCCAT GTTTCTGGTG GGGTTTGAAA CCCTCTACAT TGCCCTCGGA
TTATTAATTG GTGCTCTAAT TAATTATTTG GTAGTTGCCC CCAAATTGCG GGTCTACACA
GAAGTCGCCG ATAACGCGCT GACTATCCCT GAGTTCTTCG CCAAACGCTT TGGTCAGGCC
GATAACAGCA TCCGTATTAT TGCCGCGGTG ATCATAGTGA TCTTTTTCAC CCTCTATACC
TCGGCAGGAT TAGTCGCGGG CGGCAAGTTA TTCGAATCTG CCTTTGGACT GAACTACGAT
ATTGGCCTAG TCGTTACCTT AGCCGTAGTG GTGTCGTACA CTCTGCTTGG GGGATTTTTA
GCCGTCAGCC TCACCGACTT TGTACAGGGC TGCATTATGT TTGTCGCCTT GGTCTTAGTG
CCTTTCGTGG CATATCAAGA ATTTACCAGC GCAGATCGCA TGATGAACTT TGCCTATCAG
TCGATCCCGC ATTTTACCGA CGCGATGCAA AATGTGACCC TGCTTGGCTT AATCTCGAGC
CTTTCTTGGG GACTTGGGTA TTTCGGTCAG CCGCATATTA TTGTGCGTTT TATGGCGATC
CGTTCCGTCG CCGACATTAA AACCGCACGA CGCATTGGCA TCAGCTGGAT GACAGTCACC
ATAATCGGCG CCTTAGCGAC GGGCTTGGTC GGTATCGCCT ACGCCAATAA ATTTGGCATG
AAGCTTTCGG ATCCTGAAAC CATCTTTATC GTGTTTTCAG AGTTACTGTT CCATCCCTTG
GTTAGTGGCT TCCTGTTGGC AGCGATTTTG GCAGCGATTA TGAGCACGAT TTCATCGCAG
TTATTGGTCT CGTCGAGTTC GCTCACCGAA GATATTTACC GCACCCTCTC AAAGAAAGAC
TCGAGCGAAA AAGAGATGGT GAAAATGGGC CGTTACGGGG TTGCAGGTGT TGCCATTGCC
GCAACGCTGC TGGCACTCGA CCGCTCGAAC AGTATCCTCT CCCTCGTGAG TAATGCTTGG
GCAGGATTTG GCGCCGCCTT CGGTCCGCTG GTGTTATTTA GTTTGTATAA AGCCAATCTC
ACCCATAAAG CGGCGATTGC GGGGATTATT TCGGGCGCGC TTACGGTACT CTTTTGGATT
TATGCCCCCG TGCTTGCCGA TGGTAAGGCA TTGAGTAGCT TAGTGTATGA GATGATCCCT
GGCTTTGTGG TCAGCAGCAC AGTGATTTAT CTGGTGAGCA AATTCGATAA CGATCCTTGT
CCTAAAACCA CTAAGCAATT CCATCAGGCC GGTCGTGTAT TGGCCGAGGA AAGCTAA
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| Protein sequence | MNSLSYISLA IYFIAMLAIG LFAYRKSTDD VSGYILGGRQ VSPQVTALSA GASDMSGWML
MGLPGAMFLV GFETLYIALG LLIGALINYL VVAPKLRVYT EVADNALTIP EFFAKRFGQA
DNSIRIIAAV IIVIFFTLYT SAGLVAGGKL FESAFGLNYD IGLVVTLAVV VSYTLLGGFL
AVSLTDFVQG CIMFVALVLV PFVAYQEFTS ADRMMNFAYQ SIPHFTDAMQ NVTLLGLISS
LSWGLGYFGQ PHIIVRFMAI RSVADIKTAR RIGISWMTVT IIGALATGLV GIAYANKFGM
KLSDPETIFI VFSELLFHPL VSGFLLAAIL AAIMSTISSQ LLVSSSSLTE DIYRTLSKKD
SSEKEMVKMG RYGVAGVAIA ATLLALDRSN SILSLVSNAW AGFGAAFGPL VLFSLYKANL
THKAAIAGII SGALTVLFWI YAPVLADGKA LSSLVYEMIP GFVVSSTVIY LVSKFDNDPC
PKTTKQFHQA GRVLAEES
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