Gene Shewmr4_3846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3846 
Symbol 
ID4254409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4592657 
End bp4593478 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content48% 
IMG OID638120491 
Producthypothetical protein 
Protein accessionYP_735966 
Protein GI113972173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCAT GTTATTCATT TATCGCAGGT ATCGCCCTGC TGCCCCTATA CACAGCGCAC 
GCGGCCGACA GTGACAATAC ACCTGTCGTG AAACCTGAAA AACAGCCTCA GGATATGTCC
GATCCGCTTG CGATTTATAC TCAAGCGGGC TTTGGCGTAA CAGATAAAGG CCTCAATTTT
AAAGTGGGCC AAGCCTATGA TACGGGAGAA GAAAACAAAG CCGGGATGAA TGTCATCGAA
GTGAAGGGGA TCTTTGGCGA TACCCTAGGC TGGCGAGGTG AAGGCGCCGC CTCAGACTCT
GTCGACTCTT TTCGATTTCG TAACTTTACC GCTAATGTCA CCAATGGCCG AGCCGCCCAA
ATTGATATCA GCTATAGCCT TAACCCTAAC TTCGTCGCTC AAGAGAGTGC CGATCTGTCC
TATAGCTTCA TCCAAGCCTT ACCACCGATG GGGCGATTCA GCCTCTATCC ACTGGTTGGC
GCAGGAGTGT CTATTGGTAA CGACGCCCTC GAGGATGATG GTTCCATCGA CAGTGGTTAC
TCCATCATGG GCGTTTACGG CCTAGTGGGA ATGTATAGCA AGCTCAAAAT CACCGACAAA
ATCTGGTTGA ATTACAATCC CTTTTGGCTG ACGACTATTT CGGGCTCTGA CAATTACACC
GACAACTATT ATGGCTTAGG CAATAGCCAT ATTTTGACCC ACGAGCTAGC ACTCAGTTAC
CAAATCAACC CGCGAATGAA CCTGCGCTAC TTTGCCAACT TTAATGAAAA CGTTAGCTTT
ATGGACGGTG ATCATAGGAT AGAGTTTAAC TACCAGCTCT AG
 
Protein sequence
MRACYSFIAG IALLPLYTAH AADSDNTPVV KPEKQPQDMS DPLAIYTQAG FGVTDKGLNF 
KVGQAYDTGE ENKAGMNVIE VKGIFGDTLG WRGEGAASDS VDSFRFRNFT ANVTNGRAAQ
IDISYSLNPN FVAQESADLS YSFIQALPPM GRFSLYPLVG AGVSIGNDAL EDDGSIDSGY
SIMGVYGLVG MYSKLKITDK IWLNYNPFWL TTISGSDNYT DNYYGLGNSH ILTHELALSY
QINPRMNLRY FANFNENVSF MDGDHRIEFN YQL