| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3842 |
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| Symbol | |
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| ID | 4254405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4587051 |
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| End bp | 4589090 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120487 |
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| Product | oligopeptidase A |
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| Protein accession | YP_735962 |
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| Protein GI | 113972169 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACC CTTTGCTTAA CGGCGCAAAA TTACCGCTTT TTTCACAGAT TAAACCTGAA
CATATTCAAG TTGCCGTTGA GCAGGCCATT GCTCAGTGTC GTGCCAAGAT TGATGAAGTG
CTGCAAAACT CAGGGCCGTT TACCTGGGAT AACTTGGTTG CCCCGCTCGA GCAAGTGGAC
GACGAGTTAA GCCAGATCTG GTCGCCCGTG TCCCATATGA ACTCAGTGGT GAGCACAGAT
GAATGGCGCG CCGCCCATGA TGCTTGTTTG CCACTGTTAT CCGAATACGG CACCTATGTG
GGCCAACACC AAGGGTTGTA TCAGGCCTAT AAATCGCTGC GTGCATCGGC AGAGTTTGAC
CAATTAAGCC AAGCACAACA GATGGTGATT GAGCACAGCT TACGGGACTT CGAGCTCTCG
GGTATCGGCT TAGATGATGG GCAAAAAGTG CGTTATGGCG AAATCGTTAA ACGCCTATCC
GAGCTGACGA GCGGCTTTTC GAATCAACTG CTCGATGCGA CTCAAGCTTG GACTAAGTTA
ATTACCGACG AGGCAGAATT AGCTGGTTTA CCCGATTCAG CTAAGGCGGC CGCAAAAGCG
ATGGCCGAGG CTCGCGAACA AGAAGGTTGG TTATTTACCT TAGATTTCCC TTCCTATTTA
CCCGTGATGA CTTACAGCGA AAACCGTAGT TTACGTGAAG AGTGTTACCG CGCCTTCGTG
ACGCGCGCCT CGGATCAAGG TCCAAACGCG GGTGAATTTG ATAATGGTCC CTTGATGGAT
GAAATCCTCG CGCTGCGCCA CGAGCTGGCA CAGTTGTTAG GCTTTGATAG TTTTGCCGAA
AAATCCCTCG CGACGAAAAT GGCCGAAACT CCAGCTCAAG TGATGGCCTT CTTAAATGAA
TTAGCGCTGC GCTCTAAGGA TCAAGCTAAG GCCGAATTAG CCGAGCTTAA AGCCTTTGCA
CTGGAGCAGT ATGGCGTGAG CGAAATGGCG TCTTGGGATT TGAGTTTCTA TGCCGAGAAG
TTACAGCAAC ATAAGTATGA GATTTCTCAA GAGTTACTGC GCCCGTACTT CCCTGAAGAT
AAAGTGCTAT CTGGCTTGTT TTACACCGTC TCGCGCCTAT TTGGTTTAAA GATTGTCGAG
CAAACTGAGT TCGACCGCTG GCATAAAGAC GTGCGTTTCT TCGATATTTT CGACGAAACG
GGCGAGCACA GAGGCAGCTT CTATTTAGAC TTATACGCCC GCACGGGCAA ACGCGGCGGC
GCTTGGATGG ATGATTGCCG CGTGCGTCGT AACACGCCCC ATGGTCTACA AAAGCCCGTG
GCTTATCTCA CGTGTAACTT CAATGGTCCA GTTGATGGCA AACCAGCACT CTTTACCCAC
GATGAAGTGA CGACGCTGTT CCATGAATTT GGCCATGGTA TTCACCATAT GCTGACCAAA
ATCGACGTGG CTGGCGTATC AGGCATCAAC GGTGTGCCTT GGGATGCGGT CGAATTGCCT
AGCCAATTTA TGGAAAACTG GTGCTGGCAA GAAGAAGCCT TAGCTGAAAT CTCCGGTCAC
TACGAAACCG GTGAACCTTT GCCAAAAGCC ATGCTAGACA AGATGTTAGC GGCGAAAAAC
TTTCAATCAG GTATGATGAT GTTGCGCCAG TTGGAGTTTT CACTGTTCGA TTTTAGACTG
CACCACGAAT ATGACCCAGC TAAAGGGGCG CGTATTCAAG AGACCTTGGA CGAAGTCCGT
CGTCAGGTGG CCGTGTTAAT TCCGCCCGCA TTTAACCGTT TCCAACATGG TTTTGCGCAT
ATTTTTGCGG GCGGTTATGC CGCGGGTTAC TACAGCTATA AGTGGGCCGA AGTGCTGTCA
GCGGATGCGT TTTCTCGCTT CGAAGAGGAA GGCATCTTCA ATCCTGATAC TGGCCGTAGC
TTCCTGCACA ACATCCTCGA AATGGGTGGT TCTGCTGAGC CGATGGACTT GTTCAAACAG
TTTATGGGTC GCGAGCCGAG TATCGATGCG CTGCTGCGCC ACTCTGGGAT TGCGGCTTAA
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| Protein sequence | MSNPLLNGAK LPLFSQIKPE HIQVAVEQAI AQCRAKIDEV LQNSGPFTWD NLVAPLEQVD
DELSQIWSPV SHMNSVVSTD EWRAAHDACL PLLSEYGTYV GQHQGLYQAY KSLRASAEFD
QLSQAQQMVI EHSLRDFELS GIGLDDGQKV RYGEIVKRLS ELTSGFSNQL LDATQAWTKL
ITDEAELAGL PDSAKAAAKA MAEAREQEGW LFTLDFPSYL PVMTYSENRS LREECYRAFV
TRASDQGPNA GEFDNGPLMD EILALRHELA QLLGFDSFAE KSLATKMAET PAQVMAFLNE
LALRSKDQAK AELAELKAFA LEQYGVSEMA SWDLSFYAEK LQQHKYEISQ ELLRPYFPED
KVLSGLFYTV SRLFGLKIVE QTEFDRWHKD VRFFDIFDET GEHRGSFYLD LYARTGKRGG
AWMDDCRVRR NTPHGLQKPV AYLTCNFNGP VDGKPALFTH DEVTTLFHEF GHGIHHMLTK
IDVAGVSGIN GVPWDAVELP SQFMENWCWQ EEALAEISGH YETGEPLPKA MLDKMLAAKN
FQSGMMMLRQ LEFSLFDFRL HHEYDPAKGA RIQETLDEVR RQVAVLIPPA FNRFQHGFAH
IFAGGYAAGY YSYKWAEVLS ADAFSRFEEE GIFNPDTGRS FLHNILEMGG SAEPMDLFKQ
FMGREPSIDA LLRHSGIAA
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