Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3839 |
Symbol | |
ID | 4254402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4584836 |
End bp | 4585525 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120484 |
Product | 3-methyladenine DNA glycosylase |
Protein accession | YP_735959 |
Protein GI | 113972166 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2818] 3-methyladenine DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGT TAGAAAGTTT CTCATCCATC TATGCCAGAG CGAGTGAACG TAAGGGCGGT AAAGCGGGAC TCGAAGCATT ATTACCCGGC TGCCTTAGCA GTGCCGAGCT TCGTCAGTAT GATGATGCAA GGCTGCTCTC AGCCATGAGC CGCCAGGTGT TTCAGAGTGG TTTTGTCTGG CGCGTGGTCG ATAACAAATG GCCTGCCTAT GAGCAGTCCT TCTTTCATTT TGCACCCGAA AAAGTATTGA TGTTATCGCC AGAGCAGATC CAAGCTCGCG CCGCGGATGC GACTCTGATC CGTCACCTTA AGAAAACCCA AGCGGTTTAT GATAATGCCT TGATGATCCA CGATATTACC CGCGAGCATG GCAGCTTGGC AAAGCTGATT GCCGACTGGC CGACCGAGGA TATAGTCGGG CTTTGGGCAC TCTTAAAGAA ACGAGGCGCT CGCCTCGGTG GCAATACGGG GCCGTATTTC CTGCGCGGTA TTGGTAAGGA CACCTTTTTG TTAACCGATG ATGTGCAGGG CTACTTTAAA GCCCACAAGT TGGTGGATGC GGGCTTTAGC TCGCAAACGG CGCTAAAGCA GGTGCAAGCG GTATTCAACC AATGGCAGCA AGAATCGGGT CGGTGTCTTG CGGATATCAG TCGCGTCTTA GCCTGCAGCG TTGGGGATAA CCGTATTTAG
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Protein sequence | MSQLESFSSI YARASERKGG KAGLEALLPG CLSSAELRQY DDARLLSAMS RQVFQSGFVW RVVDNKWPAY EQSFFHFAPE KVLMLSPEQI QARAADATLI RHLKKTQAVY DNALMIHDIT REHGSLAKLI ADWPTEDIVG LWALLKKRGA RLGGNTGPYF LRGIGKDTFL LTDDVQGYFK AHKLVDAGFS SQTALKQVQA VFNQWQQESG RCLADISRVL ACSVGDNRI
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