Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3838 |
Symbol | |
ID | 4254401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4583987 |
End bp | 4584733 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638120483 |
Product | hypothetical protein |
Protein accession | YP_735958 |
Protein GI | 113972165 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATTA TGAAGACTCG TACTAAATTT CTGCTGACAG GAGCATTGCT TTCTTTGGCG GCAAGCTCTC ACGGCGCCGA AGATAATCAA CTCTTTGGTG GCACTATTAA TGGCAATGTT AACTTTGCTT CAGATTATGT TTTTCGCGGT GAATCTGAAA CTTTAGACGG TGATATTCCC GTCGTACAAG GCACACTAAG CTGGAACCAC AACCAAGGCT GGTATGCGGG CGTATTCAGC TCCAACATCA AATTTGCCGA CCCTAACCTA GAGATAGTCA CCGCGCCATT TATTGGTAAA GCGGGTGAAT TTGGCGACTC GGGTTTTACC TATGATGTGA TGCTGTTTTC ATACCTTTAT CCCGGTGCGT CCTACTCCAA CTATACCGAG TTATGGTTAA AAGTGGGCAA ACAATTTGGC CGCGCAAATC TGCAACTCGA AGTCACCCCA ACGGTGGATG ATTGGTTTGG TGTCGATGGC TGGCACGGCG TTAACTATGC CTTGCACCCA AGCTATAGCT TTGATAATGG TGTAAAAATC TCAGCTTCCG TTGGTTATCA AGACTTAAGT GGTAATGGCG CCGAAGGTTG GGGTCACTGG AACATTGGCC TAAGCAAGGC TTATTACGGC CTTAACTTCG ACCTACGTTA CCACGGCAGC ACTGTGGAAA GTGACCATAA AGTCTATGGC ACACAAACTG AAATCTTCGA TGACAGAGTC GTCATTGGGA TCAGTAAAAG TTTCTAA
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Protein sequence | MMIMKTRTKF LLTGALLSLA ASSHGAEDNQ LFGGTINGNV NFASDYVFRG ESETLDGDIP VVQGTLSWNH NQGWYAGVFS SNIKFADPNL EIVTAPFIGK AGEFGDSGFT YDVMLFSYLY PGASYSNYTE LWLKVGKQFG RANLQLEVTP TVDDWFGVDG WHGVNYALHP SYSFDNGVKI SASVGYQDLS GNGAEGWGHW NIGLSKAYYG LNFDLRYHGS TVESDHKVYG TQTEIFDDRV VIGISKSF
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