Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3828 |
Symbol | |
ID | 4254391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4571704 |
End bp | 4572489 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120473 |
Product | hypothetical protein |
Protein accession | YP_735948 |
Protein GI | 113972155 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.23857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGCAA TTTCTACCTG TCAAACAGTG ATCCCTTTGC CTATTCCAGT CTTTTTTAAT CAGCAATTTC CAACTCTTGT GGACATTTGT GCCCGTTGGC AACTGGTTTT TGATGCCGAT GCGCCATTTG AATTGCGTTT TGAATCAGAC ACCTTGACGC TACATAAGCG CGATGAGCCT AAGCTCGATG GCATAATGGT GGATTTTGTA ACTGGCGCGG TTGCCCATAG ACGCAAGTTT GGTGGCGGTC GTGGGCAGTC GATTGCTAAG GCTGTTGGGT TAAAACAAGG CGTTACGCCA AAAGTGGTCG ATGGCACTGC GGGTCTAGGC CGCGATGCTT TTGTGCTGGC AAGCTTGGGC TGCACTGTGA CTATGGTAGA GCGCCATCCT GTGGTGGCCG CATTATTAGA AGACGGCTTG CGCCGCGCCT ATCAGGATGC CGAAATCGGC GACTGGATGC GTGAACGTAT GCAGCTTTTC CATGGATCCA GCCTCGAAGC ACTCGCCAAA TTGGAGCAAG AGGTTGATGT GGTCTACCTC GACCCTATGT ACCCCCACCG CGACAAATCA GCCTTAGTCA AAAAAGAAAT GCGAGTATTC CAAACCTTAG TCGGTGCAGA CCTCGACGCC GATGGTTTGC TCGCCCCCGC CATGGCCCTA GCCAGTAAGC GTGTTGTGGT AAAGCGCCCC GATTATGCCG AAGACCTCGC TGGCGTTAAG CCCAGTATGG TTATCGAAAC GAAGAAAAAC CGCTTCGATG TCTATGTGAA ATCGGCAATG AAGTAG
|
Protein sequence | MAAISTCQTV IPLPIPVFFN QQFPTLVDIC ARWQLVFDAD APFELRFESD TLTLHKRDEP KLDGIMVDFV TGAVAHRRKF GGGRGQSIAK AVGLKQGVTP KVVDGTAGLG RDAFVLASLG CTVTMVERHP VVAALLEDGL RRAYQDAEIG DWMRERMQLF HGSSLEALAK LEQEVDVVYL DPMYPHRDKS ALVKKEMRVF QTLVGADLDA DGLLAPAMAL ASKRVVVKRP DYAEDLAGVK PSMVIETKKN RFDVYVKSAM K
|
| |