Gene Shewmr4_3828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3828 
Symbol 
ID4254391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4571704 
End bp4572489 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content52% 
IMG OID638120473 
Producthypothetical protein 
Protein accessionYP_735948 
Protein GI113972155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.23857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAA TTTCTACCTG TCAAACAGTG ATCCCTTTGC CTATTCCAGT CTTTTTTAAT 
CAGCAATTTC CAACTCTTGT GGACATTTGT GCCCGTTGGC AACTGGTTTT TGATGCCGAT
GCGCCATTTG AATTGCGTTT TGAATCAGAC ACCTTGACGC TACATAAGCG CGATGAGCCT
AAGCTCGATG GCATAATGGT GGATTTTGTA ACTGGCGCGG TTGCCCATAG ACGCAAGTTT
GGTGGCGGTC GTGGGCAGTC GATTGCTAAG GCTGTTGGGT TAAAACAAGG CGTTACGCCA
AAAGTGGTCG ATGGCACTGC GGGTCTAGGC CGCGATGCTT TTGTGCTGGC AAGCTTGGGC
TGCACTGTGA CTATGGTAGA GCGCCATCCT GTGGTGGCCG CATTATTAGA AGACGGCTTG
CGCCGCGCCT ATCAGGATGC CGAAATCGGC GACTGGATGC GTGAACGTAT GCAGCTTTTC
CATGGATCCA GCCTCGAAGC ACTCGCCAAA TTGGAGCAAG AGGTTGATGT GGTCTACCTC
GACCCTATGT ACCCCCACCG CGACAAATCA GCCTTAGTCA AAAAAGAAAT GCGAGTATTC
CAAACCTTAG TCGGTGCAGA CCTCGACGCC GATGGTTTGC TCGCCCCCGC CATGGCCCTA
GCCAGTAAGC GTGTTGTGGT AAAGCGCCCC GATTATGCCG AAGACCTCGC TGGCGTTAAG
CCCAGTATGG TTATCGAAAC GAAGAAAAAC CGCTTCGATG TCTATGTGAA ATCGGCAATG
AAGTAG
 
Protein sequence
MAAISTCQTV IPLPIPVFFN QQFPTLVDIC ARWQLVFDAD APFELRFESD TLTLHKRDEP 
KLDGIMVDFV TGAVAHRRKF GGGRGQSIAK AVGLKQGVTP KVVDGTAGLG RDAFVLASLG
CTVTMVERHP VVAALLEDGL RRAYQDAEIG DWMRERMQLF HGSSLEALAK LEQEVDVVYL
DPMYPHRDKS ALVKKEMRVF QTLVGADLDA DGLLAPAMAL ASKRVVVKRP DYAEDLAGVK
PSMVIETKKN RFDVYVKSAM K