| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3817 |
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| Symbol | |
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| ID | 4254380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4557335 |
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| End bp | 4558018 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120462 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_735937 |
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| Protein GI | 113972144 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000444115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00121668 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGACTCT TACTCGTTGA AGACGATTTA GCGCTTCAAG CCAACTTAAA ACAGCACTTG
CTCGATGCTC ACTACAGCAT AGATGTCGCC AGCGACGGTG AAGAAGGCCT GTATCAGGCC
ATTGAATATA ATTATGATGC CGCGATTATC GATGTCGGTT TGCCTAAACT CGACGGCATA
AGCCTTATCC GCCGCGTGCG CGAAAAAGAA CGCGCGTTCC CCATCTTGAT CTTAACCGCG
CGGGATAGTT GGCAGGATAA AGTCGAGGGC CTCGATGCGG GTGCCGACGA CTATCTCACT
AAGCCCTTCC ACCCCGAGGA ATTAGTGGCT CGGCTCAAAG CCTTGATCCG CCGCTCGGCC
GGTAAAGCCA GCCCAGTGAT TACTAATGGC CCCTTTAGTT TAAATACCAG TAGCTTAGAA
GTGCGCAAAG GGGATGAGCT CGTCACCCTA AGCGGCTCTG AATACAAGCT ATTTGAGATT
TTTATGCTGC ATCAGGGCGA AGTGAAGTCG AAAACTGCGC TCACCGAACA TATCTACGAT
CAGGATTTTG ACCTCGACTC CAACGTTATC GAAGTCTTTA TCCGCCGTTT ACGCAAAAAG
CTCGACCCAG ATAACCAATA CAATCTGATC GAAACCCTGC GCGGCCAAGG CTATCGTTTA
AGAGTCATCT CCCCAGATGA GTAA
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| Protein sequence | MRLLLVEDDL ALQANLKQHL LDAHYSIDVA SDGEEGLYQA IEYNYDAAII DVGLPKLDGI
SLIRRVREKE RAFPILILTA RDSWQDKVEG LDAGADDYLT KPFHPEELVA RLKALIRRSA
GKASPVITNG PFSLNTSSLE VRKGDELVTL SGSEYKLFEI FMLHQGEVKS KTALTEHIYD
QDFDLDSNVI EVFIRRLRKK LDPDNQYNLI ETLRGQGYRL RVISPDE
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