Gene Shewmr4_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3816 
Symbol 
ID4254379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4557031 
End bp4557333 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content51% 
IMG OID638120461 
Productpeptidase 
Protein accessionYP_735936 
Protein GI113972143 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0134174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00511422 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTTG GTTTGACACT GACCCTAGTC GCTTGCTTAT GCACCTCCTT TGGCAGCATG 
GCGGGCAATG ATAAACACGA TGATCGTAAT CAATCGCGCG GCCAAGGTGT GAAGAATGAA
CAGCGCCGCC TTGTGGTCAA CAGTCCAGAT CAAGCCGTGG CGATGGCGCA ACGTCAATAT
CGAGGAAAAG TGCTCAGCGT GCAGTCGAGT GGCTCAGGCT ATAGAGTCAA AATCCTCAAT
AACGATGGCC AAGTTTTTTC TGTTTCGGTG GATGCCGCCA CTGGGCGTGT TTCGAGGAAT
TAA
 
Protein sequence
MKLGLTLTLV ACLCTSFGSM AGNDKHDDRN QSRGQGVKNE QRRLVVNSPD QAVAMAQRQY 
RGKVLSVQSS GSGYRVKILN NDGQVFSVSV DAATGRVSRN