Gene Shewmr4_3814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3814 
Symbol 
ID4254377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4555006 
End bp4555479 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID638120459 
Productredoxin domain-containing protein 
Protein accessionYP_735934 
Protein GI113972141 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.632392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0206857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCTC AAGGTCAAAC ATTACCAGCG GCGACGCTAA GCCAACTAAC TAAAGATGGC 
ATGGTAAATC ATCAAGTTAC CGAGTTGTTC GCGGGTAAAA AAGTGGTGTT ATTTGCAGTG
CCTGGTGCTT TCACACCAAC TTGTTCTGAA GCGCATTTGC CAGGTTATGT GGTGCTGGCC
GATCAATTTA AAGCTAAAGG CGTTGATTTA ATTGCCTGTG TATCGGTAAA CGATGCCTTT
GTGATGAAAG CTTGGGGCGA AGCGCAAAAT GCGTCTGAGT TACTGATGCT TGCCGATGGC
GATGCCAGCT TTACTAAGGC GCTTGGGTTA GAGATGGATA CCGCTGGCTT TGGTGGTGTA
CGTTCACAAC GTTATGCGAT GATCATCGAT AACGGCGTGG TGACTTTACT GAATGTAGAA
GCACCTAAGT CATTTGAAGT GAGCAAAGCC GAAGTGGTAT TAGCGGCACT TTAA
 
Protein sequence
MIAQGQTLPA ATLSQLTKDG MVNHQVTELF AGKKVVLFAV PGAFTPTCSE AHLPGYVVLA 
DQFKAKGVDL IACVSVNDAF VMKAWGEAQN ASELLMLADG DASFTKALGL EMDTAGFGGV
RSQRYAMIID NGVVTLLNVE APKSFEVSKA EVVLAAL