Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3814 |
Symbol | |
ID | 4254377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4555006 |
End bp | 4555479 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638120459 |
Product | redoxin domain-containing protein |
Protein accession | YP_735934 |
Protein GI | 113972141 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.632392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0206857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGCTC AAGGTCAAAC ATTACCAGCG GCGACGCTAA GCCAACTAAC TAAAGATGGC ATGGTAAATC ATCAAGTTAC CGAGTTGTTC GCGGGTAAAA AAGTGGTGTT ATTTGCAGTG CCTGGTGCTT TCACACCAAC TTGTTCTGAA GCGCATTTGC CAGGTTATGT GGTGCTGGCC GATCAATTTA AAGCTAAAGG CGTTGATTTA ATTGCCTGTG TATCGGTAAA CGATGCCTTT GTGATGAAAG CTTGGGGCGA AGCGCAAAAT GCGTCTGAGT TACTGATGCT TGCCGATGGC GATGCCAGCT TTACTAAGGC GCTTGGGTTA GAGATGGATA CCGCTGGCTT TGGTGGTGTA CGTTCACAAC GTTATGCGAT GATCATCGAT AACGGCGTGG TGACTTTACT GAATGTAGAA GCACCTAAGT CATTTGAAGT GAGCAAAGCC GAAGTGGTAT TAGCGGCACT TTAA
|
Protein sequence | MIAQGQTLPA ATLSQLTKDG MVNHQVTELF AGKKVVLFAV PGAFTPTCSE AHLPGYVVLA DQFKAKGVDL IACVSVNDAF VMKAWGEAQN ASELLMLADG DASFTKALGL EMDTAGFGGV RSQRYAMIID NGVVTLLNVE APKSFEVSKA EVVLAAL
|
| |