Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3803 |
Symbol | |
ID | 4254366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4540190 |
End bp | 4542127 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638120448 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_735923 |
Protein GI | 113972130 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.6032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAGGA TTTTACCTTT GTTACTCCTG TGGCTAAGTC TGCCACTGCT TGCTCAAACG GTACCACAGC TTCCGGTCGA GGCTTTTGCC AGTATTCCCG ATGTCAGCTC AGTCCAACTG TCGCCCGATG GCAAAAAAAT TGCCTCTATC GTTCGGGTCG ATCAGCCCAA ACTTAAGGGC ACTGTGGTCA GTATTCTCGA TTTAGAAACG GGCAACAAAG ACTACGCGAT TCACACCGAT AACCAGAAGT TTGTCCTACT GTCATTACAG TGGGCAAATG ACACTACTTT GCTGATCAGC GCTAAGTTTC CGGCAAACCG CTACGGTACA CCGACCACAG AAACTCGCTT GGTGAAGTAC GATTTAACTA CACGAAAAAC CACGAGCGTA CTCGCCCGTA GCGTCATCGA CCGACTCAGT TGGATCCCCC AACATCAGGG ACAGATTATC GATATGATGC CGGATGACCC CGATAATATT TTGCTCTCCC TCGATGGTAT GGGCGAAGAA GTAGGTGAAG ACAGCGTGCT GAGAGTCAAT CTCTCTCAAG GAAAATCCGC ATTTATTCAA AACTCTAAAC GTAAAATCAT CGGCTGGATT ACCGACAGAC AGCACAAGGT CCGTATCTCC ATCTATAACG ATGACACTGA ATATAGGATC TACGAGCAAC CAGAACAAAA GGCAGAGCCA CGCTTACTCT GGACCTTTAA AGCCTTCTCC GACGAGAGCG TCTGGCCACT GGGCTTTGAT GCCGACCCCA ACATCTTATT CGTACGCGCC TACCACCAAG GCTTTGAAGC TATCTTCAAG GTGAATTTAA CCGCTCCTAA GCTCACGAAG GAGCTGGTGT ACGCCAACGA AGATACCGAT GTTGAAGGCA ATCTCATCTA TTCAGAACTC AAGAAAAAAG TCATTGGGAT CAGTGAAGGC GACGGCGAAG AATATACCTT CTGGGATCCT GAATATGCGG GTCTGCAAAA TGGGTTGAAA GCGGTATTGC CCAATGCCCA TAACTACATC ACCCAATTTA GCGCGGATGA ACGCCGCTAT ATCGTCTACT CCACCAGTTC GACTCAACCT GGCACCTATT ACTTCGGCGA TAGGGATGAA AAGGCGCTGT TTCCGATTGC CGATAGATAT AGCCAGCTAA GCAGCGAGCA ACTCGCCGAC ACTCAATATC TGAGCTACGA AGCGCGGGAT AAACTCAAAA TCGATGCTTA CCTGACAGTG CCAAAGGGCC TCGAAGCCAA GCAACTCCCC ACCATTATCT TCCCCCACGG CGGGCCGATT AGTTACGACA GTAACGATTT CGATTATTGG TCGCAGTTTT TCGCTAACCG TGGCTACGCG GTGTTTCGAA TGAACTTTAG GGGCTCGGCG GGCTACGGCT ATGAGTTTAT GAAGGCCGGC CTCAAAAGCT GGGGACTCGA AATGCAAAAC GATGTGGAAG ATGGTACACG TTACTTAATC AATCAAGGGA TTAGCGATCC ACAGCGTATC TGTATCGTCG GCGCGAGTTA TGGTGGTTAT GCCGCCTTAA TGGGCGCGGC GATGACACCT GATCTGTACC GCTGCGCGGT CAGTGTGGCA GGCGTAACAG ACGTGGCTTA CCTGGTAAAA TCCAGTCGCC GTTTCACCAA TTATGAAGTT GTTAAAGAAC AAATTGGCGA TGATTTTAGC GCCCTCTATG AACGCTCACC CGTTAGTAAG GCCGATAAGA TTACTATCCC GGTATTACTA CTGCATGGCA ATAAGGATCG AGTGGTTAAG GTGCAACATA GTCGCGAAAT GTTCGATGAA CTGAAATCAC GTAAGAAAAA CGTCGAATAT ATTGAGCTCG AAAATGGCGA CCATTACTTA AGTAACAATG ACCATAGGCT AACCACCTTT AAAGCGCTCG ATAAGTTTTT AGCCGACAAT CTTAAAACCC AGCTGTAG
|
Protein sequence | MKRILPLLLL WLSLPLLAQT VPQLPVEAFA SIPDVSSVQL SPDGKKIASI VRVDQPKLKG TVVSILDLET GNKDYAIHTD NQKFVLLSLQ WANDTTLLIS AKFPANRYGT PTTETRLVKY DLTTRKTTSV LARSVIDRLS WIPQHQGQII DMMPDDPDNI LLSLDGMGEE VGEDSVLRVN LSQGKSAFIQ NSKRKIIGWI TDRQHKVRIS IYNDDTEYRI YEQPEQKAEP RLLWTFKAFS DESVWPLGFD ADPNILFVRA YHQGFEAIFK VNLTAPKLTK ELVYANEDTD VEGNLIYSEL KKKVIGISEG DGEEYTFWDP EYAGLQNGLK AVLPNAHNYI TQFSADERRY IVYSTSSTQP GTYYFGDRDE KALFPIADRY SQLSSEQLAD TQYLSYEARD KLKIDAYLTV PKGLEAKQLP TIIFPHGGPI SYDSNDFDYW SQFFANRGYA VFRMNFRGSA GYGYEFMKAG LKSWGLEMQN DVEDGTRYLI NQGISDPQRI CIVGASYGGY AALMGAAMTP DLYRCAVSVA GVTDVAYLVK SSRRFTNYEV VKEQIGDDFS ALYERSPVSK ADKITIPVLL LHGNKDRVVK VQHSREMFDE LKSRKKNVEY IELENGDHYL SNNDHRLTTF KALDKFLADN LKTQL
|
| |