Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3794 |
Symbol | |
ID | 4254357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4532396 |
End bp | 4533271 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638120439 |
Product | cytochrome c oxidase, subunit III |
Protein accession | YP_735914 |
Protein GI | 113972121 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTA AACATGAGAC TTACTACGTA CCCGCCCAGA GTGCTTGGCC GATTGTTGGT GCTATCGGCT TGTTTTTAAC TGCCTTTGGG GCAGGACATT TTGTACATCA ACTCAAATCT GGCGCTTCGG GTGGCGGCTA TATTCTACTG GCAGGCATAG CCGTCATCCT GTTTATGCTG GTTGGCTGGT TTAGAACCGT GATCAAAGAA TCGATGACGG GCCTCTATTC CCATCAGATG GATAGATCGT TTCGCCAAGG CATGAGCTGG TTCATCTTCT CAGAGGTGAT GTTCTTTGCC GCCTTCTTCG GCGCCTTATT TTACGCCCGC ATGGTCGCAG TGCCTTGGCT CGGCGGTGCC TCTAACAATG CCATGACCCA CGAAGTCCTG TGGCCACACT TCGAAGCCGT TTGGCCACTC GTCACCACGC CTGATGGCAC CAAAACCGAA GCCATGCCAT GGAATGGACT ACCGCTAGTC AACACCATAG TGCTGCTAAC CTCCTCAGTC ACGCTGCATT TTGCCCATAT CAGCTTAGAA AAAGGTAAGC GTTCGGCCAT CACCCTCTGG CTTGGGCTCA CGATTTTGTT GGGAATTAGC TTCCTTGCTT TGCAAGCGGA GGAATATAGC CATGCCTACC ATGAGATGGG GCTAACGCTC ACCTCGGGCG TGTATGGCAA CACCTTTTTC CTGCTGACGG GTTTCCACGG CATGCATGTC ACTTTGGGCA CTATCTTTCT ATTAGTCTTG TTTTTCAGGG TGTTAAAAGG CCACTTTAGT GCGGATAAGC ATTTTGCCTT CCAAGCGGGC AGTTGGTACT GGCACTTTGT CGACGTAGTT TGGCTCTGCC TATTTATCTT TGTTTATGTG CTTTAA
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Protein sequence | MTTKHETYYV PAQSAWPIVG AIGLFLTAFG AGHFVHQLKS GASGGGYILL AGIAVILFML VGWFRTVIKE SMTGLYSHQM DRSFRQGMSW FIFSEVMFFA AFFGALFYAR MVAVPWLGGA SNNAMTHEVL WPHFEAVWPL VTTPDGTKTE AMPWNGLPLV NTIVLLTSSV TLHFAHISLE KGKRSAITLW LGLTILLGIS FLALQAEEYS HAYHEMGLTL TSGVYGNTFF LLTGFHGMHV TLGTIFLLVL FFRVLKGHFS ADKHFAFQAG SWYWHFVDVV WLCLFIFVYV L
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