Gene Shewmr4_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3794 
Symbol 
ID4254357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4532396 
End bp4533271 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content50% 
IMG OID638120439 
Productcytochrome c oxidase, subunit III 
Protein accessionYP_735914 
Protein GI113972121 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTA AACATGAGAC TTACTACGTA CCCGCCCAGA GTGCTTGGCC GATTGTTGGT 
GCTATCGGCT TGTTTTTAAC TGCCTTTGGG GCAGGACATT TTGTACATCA ACTCAAATCT
GGCGCTTCGG GTGGCGGCTA TATTCTACTG GCAGGCATAG CCGTCATCCT GTTTATGCTG
GTTGGCTGGT TTAGAACCGT GATCAAAGAA TCGATGACGG GCCTCTATTC CCATCAGATG
GATAGATCGT TTCGCCAAGG CATGAGCTGG TTCATCTTCT CAGAGGTGAT GTTCTTTGCC
GCCTTCTTCG GCGCCTTATT TTACGCCCGC ATGGTCGCAG TGCCTTGGCT CGGCGGTGCC
TCTAACAATG CCATGACCCA CGAAGTCCTG TGGCCACACT TCGAAGCCGT TTGGCCACTC
GTCACCACGC CTGATGGCAC CAAAACCGAA GCCATGCCAT GGAATGGACT ACCGCTAGTC
AACACCATAG TGCTGCTAAC CTCCTCAGTC ACGCTGCATT TTGCCCATAT CAGCTTAGAA
AAAGGTAAGC GTTCGGCCAT CACCCTCTGG CTTGGGCTCA CGATTTTGTT GGGAATTAGC
TTCCTTGCTT TGCAAGCGGA GGAATATAGC CATGCCTACC ATGAGATGGG GCTAACGCTC
ACCTCGGGCG TGTATGGCAA CACCTTTTTC CTGCTGACGG GTTTCCACGG CATGCATGTC
ACTTTGGGCA CTATCTTTCT ATTAGTCTTG TTTTTCAGGG TGTTAAAAGG CCACTTTAGT
GCGGATAAGC ATTTTGCCTT CCAAGCGGGC AGTTGGTACT GGCACTTTGT CGACGTAGTT
TGGCTCTGCC TATTTATCTT TGTTTATGTG CTTTAA
 
Protein sequence
MTTKHETYYV PAQSAWPIVG AIGLFLTAFG AGHFVHQLKS GASGGGYILL AGIAVILFML 
VGWFRTVIKE SMTGLYSHQM DRSFRQGMSW FIFSEVMFFA AFFGALFYAR MVAVPWLGGA
SNNAMTHEVL WPHFEAVWPL VTTPDGTKTE AMPWNGLPLV NTIVLLTSSV TLHFAHISLE
KGKRSAITLW LGLTILLGIS FLALQAEEYS HAYHEMGLTL TSGVYGNTFF LLTGFHGMHV
TLGTIFLLVL FFRVLKGHFS ADKHFAFQAG SWYWHFVDVV WLCLFIFVYV L