| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3792 |
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| Symbol | |
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| ID | 4254355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4530224 |
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| End bp | 4531816 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120437 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_735912 |
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| Protein GI | 113972119 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAC TGACTCAAGA TCAAATTGCC GCCCATGATG AACACCATCA CGGTGCACCT
AAAGGCATCA TGCGCTGGTT ACTCACCACT AACCACAAGG ACATTGGCAC CCTGTACCTG
TGGTTTAGTT TCATTATGTT TTTAACCGGT GGTGCGATGG CCATGGTGAT CCGCGCCGAA
CTCTTTCAAC CCGGATTACA ACTCGTTGAG CCTAACTTCT TCAACCAAAT GACCACTGTG
CATGGGTTAA TCATGGTATT CGGCGCCGTG ATGCCGGCCT TTACAGGGCT GGCTAACTGG
CTGATCCCGA TGATGATTGG CGCGCCTGAT ATGGCGCTTC CACGGATGAA CAACTGGAGT
TTTTGGATCC TGCCCTTCGC CTTTACTATT TTACTGAGCT CACTGTTTAT GGAAGGCGGT
GGCCCTAACT TTGGTTGGAC CTTCTACGCA CCACTCTCGA CCACTTATAG CCCTGACAGC
ACAGCATTAT TTGTTTTCTC GATTCATATC ATGGGGATAA GTTCGATCAT GGGTGCCATC
AACGTGATCG TCACCATAGT CAACCTGCGC GCTCCCGGCA TGACGTGGAT GAAGTTACCG
TTGTTTGTCT GGACTTGGCT GATTACCGCC TTCTTGCTGA TCGCCGTGAT GCCCGTACTC
GCGGGCGCCG TTACTATGGT GTTAACCGAT AAGTTTTTCG GTACTAGCTT CTTCGAGGCG
GCAGGTGGTG GTGATCCTGT TATGTTCCAG CATATCTTCT GGTTCTTCGG TCACCCCGAA
GTCTACATCA TGATTCTGCC TTCCTTCGGC ATCATCTCCG CCATAGTTCC GGCTTTCAGC
CGTAAACCAT TATTCGGCTA TTCATCCATG GTGTATGCCA CGGCGAGTAT TGCGATTCTG
TCCTTCCTCG TGTGGGCGCA CCATATGTTC ACCACAGGTA TGCCTGTGTT TGCCGAGTTG
TTTTTTATGT ACTGCACTAT GCTGATTGCC GTGCCGACTG GGGTAAAAGT GTTTAACTGG
GTAGCGACTA TGTGGCGCGG CTCATTGAGT TTTGAAACCC CAATGTTGTT CGCGGTGGCC
TTTATTATCC TGTTCACTAT TGGCGGCTTC TCTGGCCTGA TGCTCGCCAT CACACCGGCC
GACTTCCAAT ACCACGATAC TTATTTTGTG GTGGCTCACT TCCATTACGT GTTGGTCACT
GGTGCGATTT TCTCCATCAT GGCGGCGGCC TATTACTGGT TGCCAAAATG GACCGGCCAT
ATGTACAGCG AAAAGCTCGG CCAGTGGCAT TTTTGGTGCT CGGTGATTTC GGTCAACGTG
TTGTTTTTCC CTATGCATTT CTTAGGTCTT GCGGGTATGC CAAGGCGTAT TCCCGATTAC
TCGATTCAAT TTGCCGATGT GAACCAAATT GTGTCGATTG GGGGTTTTGC CTTTGGTCTT
TCTCAGCTGA TTTTCCTCGT GCTGGTGATT AAGTGCATTC GGGGCGGCGA AAAGGCGCCC
GCCAAACCTT GGGAAGGCAG CGAAGGCTTA GAGTGGACCC TACCCAGCCC TGCGCCCTAC
CACTCTTTCA CCACGCCACC CGAGGTGAAA TAA
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| Protein sequence | MSTLTQDQIA AHDEHHHGAP KGIMRWLLTT NHKDIGTLYL WFSFIMFLTG GAMAMVIRAE
LFQPGLQLVE PNFFNQMTTV HGLIMVFGAV MPAFTGLANW LIPMMIGAPD MALPRMNNWS
FWILPFAFTI LLSSLFMEGG GPNFGWTFYA PLSTTYSPDS TALFVFSIHI MGISSIMGAI
NVIVTIVNLR APGMTWMKLP LFVWTWLITA FLLIAVMPVL AGAVTMVLTD KFFGTSFFEA
AGGGDPVMFQ HIFWFFGHPE VYIMILPSFG IISAIVPAFS RKPLFGYSSM VYATASIAIL
SFLVWAHHMF TTGMPVFAEL FFMYCTMLIA VPTGVKVFNW VATMWRGSLS FETPMLFAVA
FIILFTIGGF SGLMLAITPA DFQYHDTYFV VAHFHYVLVT GAIFSIMAAA YYWLPKWTGH
MYSEKLGQWH FWCSVISVNV LFFPMHFLGL AGMPRRIPDY SIQFADVNQI VSIGGFAFGL
SQLIFLVLVI KCIRGGEKAP AKPWEGSEGL EWTLPSPAPY HSFTTPPEVK
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