| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3791 |
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| Symbol | |
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| ID | 4254354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4528673 |
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| End bp | 4530214 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638120436 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_735911 |
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| Protein GI | 113972118 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCAAT GGTTGTATTG TTTACTCGTG GTGCTATTCG CCCCACCGTT GCCCGCAGCG
GACATGCGGT TCAACATGAC CCCCGGCGTA ACAGAAATCA GTGGCAAGGT TTATCACTTA
CACATGACGA TTCTGTATAT CTGCTGCGCG ATAGGCCTAG TGGTTTTTGG CGTGATGATT
TATGCCATGA TCAACCACAG AAAATCCAAG GGCGCGGTCG CGTCTCACTT CCATGAGAGC
ACAAAAGTCG AAATCGCGTG GACGATTATT CCTTTTGTCA TTCTGATCTT AATGGCGATT
CCCGCCACGA AAACTCTGAT TGCCATGGAA GATCCCAGCA ATGCCGATCT CACGGTAAAA
GTCACAGGTT CTCAATGGAA ATGGCATTAT AGCTACTTCG ATCAAGATAT TGATTTTTAC
AGTATTCTCG CGACTCCAAG ACCTCAAATC GAAGGAAGTG AAGCCAAGGG AGAGCACTAC
TTACTCGAGG TCGATAAACC CCTAGTATTA CCCATCAATC GTAAAATCCG CTTCTTGATG
ACCTCAGAGG ATGTCATCCA CTCATGGTGG ATGCCCGCCT TTGCGGTAAA AAAAGACGCT
AACCCAGGTT TTATCAACGA GGCGTGGACC CGTATCGACA AACCCGGCAT TTACCGTGGC
CAATGTGCCG AGCTTTGCGG TAAAGACCAT GGCTTTATGC CGATAGTGGT ACAGGCATTG
CCCGAAGCCG AGTTCGATGC ATGGGTTGAA GAACAAAAAC AAGCCGCCAA TGCCGCTGCG
CAAGCCGCAC AAGCTGCGTT ATCGCAAACA CTGACGAAAG AAGAGCTGAT GGCTCAGGGT
GAGCAAGTTT ACCTCGGTCA CTGCGCGGCC TGTCACCAAC CCAACGGTGA AGGTTTACAG
GGGGTATTCC CGCACCTCAA AGGCAGCCCC ATTGCGACCG GACCACTGAG CGGCCATCTT
GAAATCGTGC TCAATGGTAA AGCGGGTACG GCCATGCAAG CCTTCGGCAA ACAATTAACG
GCCCAAGAGA TTGCCGCCGT AGTTACCTAT GAGCGTAATG CGTGGGGCAA TAACACGGGG
GATGCGGTAC AAGCCAAAGA CGTAGATGCC CATAAATCCG GTGGCACCAA TAGCGAACCA
GTTGCAACGA CTCCGCCTCC AGCAACTACC GATGCGCCTA AGCCGGCGAC AGAACCCGCC
GCCAGTGTCG ACCCCGCGAG TCTTCCCACG CTTAGCCATG ATGAACTGAT GGCCGAAGGG
GAAAAGACCT ATGCCACGAT TTGCGCCGCC TGCCACCAGC TAACGGGTGC TGGCATGCCT
CCCGCCTTCC CCGCCCTTGC TGGCAGCGCT ATCGCAACAG GTCCGGTAGC CAATCACATC
GACATAGTGA TGCACGGTAA ACCGGGCACG GCGATGCAGG CATTTGGCAC ACAACTCACG
CCACAACAGC TTGCCGCCAT CATTACCTAT GAGCGCAATG CGTGGGGCAA CAATACTGGC
GATACAGTGC AACCCGCTGA TATTGCTCGC CATGGACAGT AG
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| Protein sequence | MKQWLYCLLV VLFAPPLPAA DMRFNMTPGV TEISGKVYHL HMTILYICCA IGLVVFGVMI
YAMINHRKSK GAVASHFHES TKVEIAWTII PFVILILMAI PATKTLIAME DPSNADLTVK
VTGSQWKWHY SYFDQDIDFY SILATPRPQI EGSEAKGEHY LLEVDKPLVL PINRKIRFLM
TSEDVIHSWW MPAFAVKKDA NPGFINEAWT RIDKPGIYRG QCAELCGKDH GFMPIVVQAL
PEAEFDAWVE EQKQAANAAA QAAQAALSQT LTKEELMAQG EQVYLGHCAA CHQPNGEGLQ
GVFPHLKGSP IATGPLSGHL EIVLNGKAGT AMQAFGKQLT AQEIAAVVTY ERNAWGNNTG
DAVQAKDVDA HKSGGTNSEP VATTPPPATT DAPKPATEPA ASVDPASLPT LSHDELMAEG
EKTYATICAA CHQLTGAGMP PAFPALAGSA IATGPVANHI DIVMHGKPGT AMQAFGTQLT
PQQLAAIITY ERNAWGNNTG DTVQPADIAR HGQ
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