| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3770 |
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| Symbol | |
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| ID | 4254333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4503887 |
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| End bp | 4505362 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638120415 |
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| Product | O-succinylbenzoate-CoA ligase |
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| Protein accession | YP_735890 |
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| Protein GI | 113972097 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.128502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAT CTCACACATT GGCACCATCC CAATCCATTG CACAGCAAGG TATCTCGCCA
TTACATAGCG CGGCGTTCAC CTCACCCACA CAAACGGCGG TTAAGTGTAA TGGACAAGAC
ATCAGCTACG CCCACTTGAG CCATATGGTG CAGGCCTTGG GTGAACAGCT CACGCGCATC
GGCGTAGGTC CAGGGCAACC ACTGGCATGT ATCAGCCGCA ATAATCTAGA GATGATTTGC
TTGTATTGGG CCTGTGTGGA TATTGGCGCA ATCTTCTTTC CTATCTCGCC ACGTTTTCCG
CTGGCGCAAG TTCAAGGGCT TATCGATAGC CACCACATTC CTTTCTATTG GAGCGAAGCG
GCGCTGGCCT TGTCAGGCAG TCATCAACTC ACGCTGGATT TTAGCCTCGA TACGGCCCCT
AGCGCCGACC TCGCCGCGAC AGCTTTTGAT ATTTATCGTC CAAGTAATGT GATTTTAACC
TCTGGCTCCA GCGGTTTTCC CAAGGCGGCC GTGCACAACC TTGCGAATCA CATTGCCAAT
GCCGAGGGCG CCCGCAGCCT GATCCCGCTG GTCACAGGCG ATGCTTGGTT GTTGTCGTTA
CCTCTGTTTC ATATTGGCGG CCTCGCCATT CTCAACCGCT GCGCCTTAGT GGCGGCGACG
GTAGTACTAC CGGATCCAAC TCTCCCGCTG CAGGTGCAAA TCGAGCGCGA CGGCTTAACC
CATGCTTCCC TCGTGCCTAC ACAGTTACTC AATCTACTCG CCGACAAACA GGCTTCACTC
AAGAGCATTA AAGCCCTACT GCTCGGCGGC GGCGCAATTT CTATCGATTT ACTTAAACAG
CTCGAACAGC GGCATATTGC CAGCTTTACC AGCTACGGCA TGACTGAGAT GGGCTCGCAA
ATCACCACAG GCCCGGCGCG AAGCGATGGC ACCAGTGGCA AATTACTCCC AGGACGTGAG
CTCAAAATTA TCGATGGAGT AATTTGGGTG CGGGGAGATT GCTTATTTAT GGGCTATCTC
ACGGATAAGG GAATAGAAAA ACCACTCGAT GCCGAGGGTT GGTTTTATAC CAAAGACAGG
GGCGAATGGG ATGCTAACGG CAATCTTAAG ATCTTGGGCC GCGTCGATAA TATGTTTATC
AGTGGTGGCG AGAACATTCA GCCAGAGGAG ATTGAAGCGG CGCTAAAACT GCATCCGCTA
ATTGATGAGG CGATCGTCTT TCCTCAGCCG GATGTGACCT TTGGCCAACT TCCCGCCGCC
ATTATTCGTG GCGACATTGT CCGCAGCGGA ACTGTCAGCA ACAACACAAG CCAAGAGATA
AGCGCAATAG AGGCTGAACT TGAAGTCTTT CTCGCCAACA AAATCGCTCG CTTTAAACGA
CCGCGCCGTT ATTACCCTTG GCCAGAGCAT GCCGAACAAA CGGGGTTAAA GGTGAATCGC
AAGCAACTTA TTGCCGCTAT TCAATCCGAA TCTTGA
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| Protein sequence | MSESHTLAPS QSIAQQGISP LHSAAFTSPT QTAVKCNGQD ISYAHLSHMV QALGEQLTRI
GVGPGQPLAC ISRNNLEMIC LYWACVDIGA IFFPISPRFP LAQVQGLIDS HHIPFYWSEA
ALALSGSHQL TLDFSLDTAP SADLAATAFD IYRPSNVILT SGSSGFPKAA VHNLANHIAN
AEGARSLIPL VTGDAWLLSL PLFHIGGLAI LNRCALVAAT VVLPDPTLPL QVQIERDGLT
HASLVPTQLL NLLADKQASL KSIKALLLGG GAISIDLLKQ LEQRHIASFT SYGMTEMGSQ
ITTGPARSDG TSGKLLPGRE LKIIDGVIWV RGDCLFMGYL TDKGIEKPLD AEGWFYTKDR
GEWDANGNLK ILGRVDNMFI SGGENIQPEE IEAALKLHPL IDEAIVFPQP DVTFGQLPAA
IIRGDIVRSG TVSNNTSQEI SAIEAELEVF LANKIARFKR PRRYYPWPEH AEQTGLKVNR
KQLIAAIQSE S
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