Gene Shewmr4_3768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3768 
Symbol 
ID4254331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4502005 
End bp4502808 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content52% 
IMG OID638120413 
Productalpha/beta hydrolase fold 
Protein accessionYP_735888 
Protein GI113972095 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACCG TGGCCCGTTA CGGGGAAGTC TCGCAGCCAA ACTTAGTCCT GCTTCACGGC 
TTTTTAGGGA CTAAGGCCGA TTGGCTGCCG CTTATCCCCG AACTGAGCCA GCATTTTCAC
TGTATCTGCC TCGATTTACC CGGACACGGC GATAATCAGC ATGAGCTGCC ATCGACGCTC
ACCAATGGTT TCGAGCATTG TGTTCAAGAC ATTATCAGTC GCCTCGATCG CCTTGGTATT
GAATCCTTTT ATCTCTACGG TTATTCCCTC GGCGGCCGTA TCGCTCTGCA CCTTGCCAAG
GCGTATCCGC AGCGCGTTTT GAGCTTATGG CTGGAGTCCT GTCATCCCGG GCTAACCGAT
ACCGCAGAGC AAGCCGCACG CAGTAAAAAC GACAACCTGT GGGCCAAGCG CTTACACAGC
TTAAGCAGTC GGGATTTTTT ACAGCTTTGG TATCAACAGG CGGTGTTTGC CGATATGACC
GACAAGGCGC GGCATGCCTT GGTAGCAAAA CGTGCGTCGC TGCTCGACCA ACATCCCAAG
CAGACACTAA AACAGATCTT TTTGGCCACA TCCCTGGCTC GCCAAGCCTC TCTCTGGGAT
GTACCTGAAA GCCTTGGCTG TGAATGCCAT TTTTTTGCGG GCAGCCAAGA TGCGAAATTC
ACTGCAATAG CAAAGGATTG GCAAGCACAA CAACCCATCA TCTTGCATCA GATTGAACAG
GCTGGGCATA ACATACATCA GGCCAATCCC ACGGCATTAG TTGCCTGCTT AAGCGCGCTA
AAGCTTAAAA AATCGATGAC TTGA
 
Protein sequence
MPTVARYGEV SQPNLVLLHG FLGTKADWLP LIPELSQHFH CICLDLPGHG DNQHELPSTL 
TNGFEHCVQD IISRLDRLGI ESFYLYGYSL GGRIALHLAK AYPQRVLSLW LESCHPGLTD
TAEQAARSKN DNLWAKRLHS LSSRDFLQLW YQQAVFADMT DKARHALVAK RASLLDQHPK
QTLKQIFLAT SLARQASLWD VPESLGCECH FFAGSQDAKF TAIAKDWQAQ QPIILHQIEQ
AGHNIHQANP TALVACLSAL KLKKSMT