Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3767 |
Symbol | |
ID | 4254330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4500284 |
End bp | 4502005 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638120412 |
Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase |
Protein accession | YP_735887 |
Protein GI | 113972094 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAACCG AAAACACAGC CACACTGAAC CTGATGTGGG GCGCACTGAT TCTGGAAGAA TTAGCACGTC TTGGTGTGCA GCATGTCTGC ATGGCACCTG GCTCACGCTC GACACCGCTA ACCTTAGCCG CAGCTCAGCA AACCAAGCTT AAACGTCACT TGCATTTCGA TGAGCGTGGC TTAGGTTTTA TGGCCCTCGG ATTAGCCAAA GCCAGCTGCG CCCCCGTGGC GATTATCACC ACCTCAGGCA CGGCCGTCGC CAACCTTTAT CCTGCGATAG TCGAAGCTTG GTTGACCCAT GTGCCCTTGA TTGTCTTAAG CGGTGACAGG CCGCCAGAGT TACTCGGTTG CGGCGCCAAC CAAGCCATAG TGCAGCCGGC GATTTTTGCC AATTATGCCC AGCAAGTAAA CCTGCCCACG CCAGATGCGC ACATTGCGCC GCAGATGTTG CTCACAACGC TCGATGAGGC GGTGGCAAAC CAAACACGCC CAGTGCATAT CAACTGCATG TACCGCGAAC CTCTATATCC GAGTGAGATG AGTGGCACCA TTCTCGATAG CGAATCGCCT TATCTGAGGC CACTGCAAAC TTGGCTGCAA CACGCCAGAC CCTACACTCA ATACGGTAAG AGTGAACAGC TCAGCAGCCC GAGCGATGAT GCCATTATGC GTTTCGTCCA CGGTAAGGGC GTAATCATCG CGGGTACACT CACGCCGGAG CAAGATCCAC AGCAACTCAT CGCCCTCTCA CAAAAGATTG GTTGGCCATT GCTGACCGAT GCACAGTCAC AACTGCGGCA ACATCCTGCG GCAATAGGCA ATATTGACCA ACTACTGCAA CACCCTAAGG CGCGCAATCT GTTGCAAGAG GCTGACCGCG TGCTGGTGTT TGGTGGGCGC TTATTGTCTA AGCGTTTGAT TGCTTACCTT GCCGAGCAAA ACTGGCACAG TTACTGGCAA GTGCTGCCAC AGCAGGACAG ACTCGACCCA AGCCATAATG CCAAACACAT TTGGCACGCC AACGCCGCGC AATTTGCTCA ACTTAACTGG TATCGCTCCT CTTCGGCCAA TTGGGCCAAC ACCTTAGTCA CCTACAACGA TGAATTACAT AGTTTATTTG TGCGTAATAT CGATCAAGGT GAGTTTGGTG AGGCGCAGGT TATCCGCGCC ATTGCCAATA CGCGGCCGTT AGAGCAGCAA TTGTTTATCG GCAATAGTCT GCCCGTGCGG TTATACGATA TGTACGCCCC AGTGAGTTGT TGCACGGCCA CCACTTATAC CAACCGAGGC GCATCGGGGA TCGACGGCTT ACTGGCCACC GCCTGCGGCA TTGCCGCGCA TCAAGGTAAA CCCACGAGCT TGATTATTGG GGACTTATCC CAGCTGCATG ATCTCAACTC GTTTGCCATT GCCCGCAGCT TAACCAGCCC GCTGGTGATC ATTATTCTCA ACAACGACGG CGGCAATATC TTTAATCTCT TGCCCGTTCC CAATGAGGAG CTGCGCAGTG ATTACTACCG CTTAAGCCAT GGTTTAGAGT TTGGTTACGC CGCTGCCATG TTTAATCTGC CATATAATCA AGTGGATAAT TTAGCCGACT TCCAAAGCTG TTATCACGAA GCGCTGGATT ATCAGGGCGC CTCGGTGATC GAAGTCAGTG TAAGCCAACA CCAAGCCAGC GAGCAGATCG CCGCGCTGAA TTTATGGGTG AAACAAAGCT AA
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Protein sequence | MRTENTATLN LMWGALILEE LARLGVQHVC MAPGSRSTPL TLAAAQQTKL KRHLHFDERG LGFMALGLAK ASCAPVAIIT TSGTAVANLY PAIVEAWLTH VPLIVLSGDR PPELLGCGAN QAIVQPAIFA NYAQQVNLPT PDAHIAPQML LTTLDEAVAN QTRPVHINCM YREPLYPSEM SGTILDSESP YLRPLQTWLQ HARPYTQYGK SEQLSSPSDD AIMRFVHGKG VIIAGTLTPE QDPQQLIALS QKIGWPLLTD AQSQLRQHPA AIGNIDQLLQ HPKARNLLQE ADRVLVFGGR LLSKRLIAYL AEQNWHSYWQ VLPQQDRLDP SHNAKHIWHA NAAQFAQLNW YRSSSANWAN TLVTYNDELH SLFVRNIDQG EFGEAQVIRA IANTRPLEQQ LFIGNSLPVR LYDMYAPVSC CTATTYTNRG ASGIDGLLAT ACGIAAHQGK PTSLIIGDLS QLHDLNSFAI ARSLTSPLVI IILNNDGGNI FNLLPVPNEE LRSDYYRLSH GLEFGYAAAM FNLPYNQVDN LADFQSCYHE ALDYQGASVI EVSVSQHQAS EQIAALNLWV KQS
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