Gene Shewmr4_3761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3761 
Symbol 
ID4254324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4495386 
End bp4495817 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content52% 
IMG OID638120406 
ProductAsnC family transcriptional regulator 
Protein accessionYP_735881 
Protein GI113972088 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATAAGT TTGATACCGC CATCATCCAC AGCCTACGCC AAGATGCTCG CCAGAGTGTC 
TCCAGTATCG CTGAGCAGGT TAACCTTTCC CGGAGTGCGG TTGCCGAACG GATAAAAAAA
CTCGAGCAAA CTGGGGTGAT CCGCGGCTAT CAGGTTTTGC TGAGCGAATC GCAAAAGGAA
GGCGTGTCGG CCTATTTCGA AATCCAGCAT AAATGCCCGC GCTGCGCCGA TGTGGTGCAT
GTGTTCCATG CCATCCCCGA GGTGATCACT TGCCGCGGTA TATCCGGCGA TATGGATTTG
CTGGTGTATG TGCACGCCCC GTCGATGCGC CGCTTGCATG AAATTCGTGA ATATATCGAT
ACCCACACGG ACATCATTAA AATCAAAACC CATGTGGTGA TGAGCGAGTG GATAAATAAC
GCGGGTGAAT AG
 
Protein sequence
MDKFDTAIIH SLRQDARQSV SSIAEQVNLS RSAVAERIKK LEQTGVIRGY QVLLSESQKE 
GVSAYFEIQH KCPRCADVVH VFHAIPEVIT CRGISGDMDL LVYVHAPSMR RLHEIREYID
THTDIIKIKT HVVMSEWINN AGE