| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3758 |
|---|
| Symbol | |
|---|
| ID | 4254321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 4492086 |
|---|
| End bp | 4492910 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638120403 |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_735878 |
|---|
| Protein GI | 113972085 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1639] Predicted signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCTG CTGCGCTACT GAGTCGAGTC GATGACTTAC CCCGTTTACC TAAAGCCATT
AGTGAGCTGC TTGAAGTAGT TAACGATGAT AATGCCACGG TCAAAAATAT TGCGACTAAG
GTGTCCCACG ATCCCTTGAT CAGCGCTAAG GTGCTGAGGC TGGCAAATTG CGCCCACTAT
GGTCACAGCC GCGAGGTGGG CAGTATTGAC GAAGCCGTTG TGCGCCTTGG CATGCAGACG
CTGCGGACGT TAGTCCTAGC GTCGGCGGTG ATGGGCTCAG TGCCTAAATG CCAAGGGGTC
GATCTCGCGC AGTTTTGGGG GCAGACCTTT GAAATTGCAC TCTATTGCCA AGAGATGGCC
AAACGTTGTG GGGTACAGCC CGATGAGGCC TTTACCTGTG GGATCCTCCA TCGGATTGGT
GACTTACTGA TTGCGGCGAT TTCCCCCGAA GATGCCGAGA AGATTACCGA AGCCGTCGCT
CAGGGCAAAG ATAAGCATAC GTTTGAGCGT GAACTGCTCG GCTATGACTC GCCCGATATT
GGCGCCCTGT TGGCCCAAAA CTGGAAATTC ACCCCCGCGC TGGTGCAGGG GATTCTTTAT
CAGGATCACC CCAAGGATTC GAATCCGTTT TCTAAATTGG CCGCCTTGTT GTGCCTCGCC
TATAAAGTGC TGGAGGAGTG GGACAGCATA GATGATGACG ATAAAACCAG TTGGTTATCG
CAATTAGCGA CCAAGAAGGG CTTAAAGATG GAAATGGGGG GATTGCGAGT CAAGTTAACA
GAACTGAGAG GCGCTGGATT CGAAATAGGT AAGGCCCTTG CTTAA
|
|---|
| Protein sequence | MDSAALLSRV DDLPRLPKAI SELLEVVNDD NATVKNIATK VSHDPLISAK VLRLANCAHY
GHSREVGSID EAVVRLGMQT LRTLVLASAV MGSVPKCQGV DLAQFWGQTF EIALYCQEMA
KRCGVQPDEA FTCGILHRIG DLLIAAISPE DAEKITEAVA QGKDKHTFER ELLGYDSPDI
GALLAQNWKF TPALVQGILY QDHPKDSNPF SKLAALLCLA YKVLEEWDSI DDDDKTSWLS
QLATKKGLKM EMGGLRVKLT ELRGAGFEIG KALA
|
|---|
| |