| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3754 |
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| Symbol | |
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| ID | 4254317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4488520 |
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| End bp | 4489977 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120399 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_735874 |
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| Protein GI | 113972081 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGACAG TGGCTGAGTT ACTGGATAGC GAATTTATCC AAGGGTTTTC GGCCTCTCTC
CTCGATGATT ACCTCAACGC CAAAAACTAT GTGCAGGATG TGCCCACCCA GTCACTGCTA
CATATCCGCA GTTTTACCCA CAGGCTGACC GAACTACTCG GTCAGGATAA AGCCGTCTCC
TTCACCAGTC CCAACCTCTA TGATCGTATC GAGCTGTTAA ACCAAAAGCG GCTGATCGAT
GTGAAGACGA CCAGAGCCTT GCATCGCCTG CGTGGCGATG GTAACCGTGG TGCCCACCCT
GAAAAATACC ATTTAACCCA AGAACAATTG CTCGCCTTGG CCCAAAAGGC CATTAAGGAT
GTGTTGGCCT TAATTGAGCA CTTGTATCCT AAGGTGATTG GGTGTGCGGC TCCCGCTTAT
CGTTACCAAG CCAGCGATGC TGTTACCATT AAAGATCTCT GTTACCGCGC GGTGATGGAA
GACGACCCTA AGGCACAATA TCTTGTGGGG ATTTCTTTTA AAACCAAAGC ATTAATGCTT
AAAGAACAAG AGCTTGCCTT AGCTGACCAA TCCTATGGTA ATGAAGATGA AAATGGCCCA
GCGGTAAAGG AAGTGGCGCA AAAAGCCAGT GATACCTTTG CCAAAGCTGC CTATTGGTTT
GCCCTCGCGG CGCCAAAACA TTCCGATGCT CTCTATGAAC ATGGGGTGGG GCTTATCCAT
GGCTATCAAG GACAGGCCGA TGCCATTCAG GGCGAAGCTG CAATTGCCAA GGCCGCTGAG
GCGGGTGTCG TCAATGCGAT GGCGTTACTC GGGTATTTTT ATCTGGTGGG CAGCGAGACA
TTTAAGCCGG ATTTAGTGCA GGCTAAGCAC TATTTACAAT TGGCGGCCGA GGGCGAGCAG
ACCGAAGCCA TGGCGAATTT AGGCGTGCTT TACTATCAGG CGAAAGATCT GACCCAAGCC
TATCATTTTA TTAATAAAGC GGCACAAGCG GGTTATCCCC ATGCCCAGTA CCATTTAGCC
TTAATGCTCG CTAATGGCGA TGGTTGTCAG CGCGATCCTA TTGTGAGTGA ATATTGGATG
GCCGAAGCGG CGGAACAGGG CCAACTCGAT GCCATGCTTA CCCGCGCACA ACACATGCTA
AACGATGAAA GTGGTTTGGG TGGCGATGTG AGTCAGGCGG AGCGTTACCT GCGTGAAGTG
ATTAAATACG GTCACAGCGT GCCAGCCATG ATTGAGTTGA GCATGGCACT CGCGGACGGT
ATTTTAGGGC GCATCGATGT GGTGGGCTCT GCGGCGCTGC TCAACCTCGC GCGCCGTCAT
GCTAATGCCA AAGAGGCCGA GATCATCGAG CCTCTCTGGC AATCACTCGC GCTGCAAATT
GATACTGTGC TGGAGATGAC TCAAGATCCC GGCGAGATTC AAACCCTTAA GCGCGCAAAA
ACCTTACTAA GCGCCTAG
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| Protein sequence | MGTVAELLDS EFIQGFSASL LDDYLNAKNY VQDVPTQSLL HIRSFTHRLT ELLGQDKAVS
FTSPNLYDRI ELLNQKRLID VKTTRALHRL RGDGNRGAHP EKYHLTQEQL LALAQKAIKD
VLALIEHLYP KVIGCAAPAY RYQASDAVTI KDLCYRAVME DDPKAQYLVG ISFKTKALML
KEQELALADQ SYGNEDENGP AVKEVAQKAS DTFAKAAYWF ALAAPKHSDA LYEHGVGLIH
GYQGQADAIQ GEAAIAKAAE AGVVNAMALL GYFYLVGSET FKPDLVQAKH YLQLAAEGEQ
TEAMANLGVL YYQAKDLTQA YHFINKAAQA GYPHAQYHLA LMLANGDGCQ RDPIVSEYWM
AEAAEQGQLD AMLTRAQHML NDESGLGGDV SQAERYLREV IKYGHSVPAM IELSMALADG
ILGRIDVVGS AALLNLARRH ANAKEAEIIE PLWQSLALQI DTVLEMTQDP GEIQTLKRAK
TLLSA
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