Gene Shewmr4_3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3746 
Symbol 
ID4254309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4479069 
End bp4479707 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content51% 
IMG OID638120391 
Productmethyltransferase type 12 
Protein accessionYP_735866 
Protein GI113972073 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACACCT GCCCCCTTTG CCACAGTGCC GATTTAGTGG CTTACCACCA AGATAAACGC 
CGTCGTTACC AACAGTGCCA GCAGTGTGCC TTGGTGAGCG TGCCTGCCGA ATTTTATCTG
AGTCCTGCAG CCGAAAAGGC TGAATACGAT AAGCACGAGA ATCACCCGCA GGATCTTGGT
TATCAGCAGT TTCTAGACAG AACCCTCGCC CCCTTGTTGA GCCGCTTTGC GCCAACGGCA
TTGGGGCTCG ATTTTGGGTG TGGTGAGGGC AAGGCGTTGA GTCTGCTGGC GCAAACGCGG
GGTTATCGGG TCGAAAACTA CGATCTCTAT TACGCCAACC ACCCCGAGTT ACTCACGCGG
CAATACGATT TCATTACCCT AACAGAGGTC ATCGAGCATG TGAGTGATGC CGATGCGTTA
CTGACCTTAT TAAATTCCTT GCTCAAACCC AAGGGCATTT TGGCCGTGAT GACGAAGCGA
GTGCTCAATC CCACGGCCTT TAGCACTTGG CATTATAAAA ATGATCCCAC CCATATTAAC
TTTTACTCCG AAGCCACCTT TCAATGGCTC GCCGAGCATT ACGGCTGGCA ACTGGAAATC
ATCGACAAAG ACGTCGTGTT TTTGCATCAA GCTAGTTAA
 
Protein sequence
MNTCPLCHSA DLVAYHQDKR RRYQQCQQCA LVSVPAEFYL SPAAEKAEYD KHENHPQDLG 
YQQFLDRTLA PLLSRFAPTA LGLDFGCGEG KALSLLAQTR GYRVENYDLY YANHPELLTR
QYDFITLTEV IEHVSDADAL LTLLNSLLKP KGILAVMTKR VLNPTAFSTW HYKNDPTHIN
FYSEATFQWL AEHYGWQLEI IDKDVVFLHQ AS