Gene Shewmr4_3744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3744 
Symbol 
ID4254307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4476839 
End bp4477834 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content52% 
IMG OID638120389 
Producthypothetical protein 
Protein accessionYP_735864 
Protein GI113972071 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCTA ACTTTCAACG CCAAGTGACA CTACTGAGCT TAATCCCGCG GGCGCCACGT 
AAAATCTCGG TGAACGAATT AGTCGAGCGG CTGGCAAACC GCACGCAGGA TATCAGTAAG
CGTTCGGTGC AAAGGGATTT AAAGGCCATG TATGAAATGG GCACCTTTGG CTTACGCCTC
GATGATAGAA ACAAGCCCTA TGGTTGGTCG ATTGAGTCCT GCTGGCGCGG GTTGAACCTA
GATCTAATGG ACCAACATAT GGCGCTGGCT TTAACCACCT TAAAGCGCAG TGCCAGTCAG
TTGATGCCAC CACAAAGCTT GCAACAACTA CAGCCCTACT TCGACAGGGC CGATCAGGTG
CTGGCTAGCG ATCCCGAAAA CCCTTGGCTC TATTGGGCGT GCCGAGTCGC ACAGCTTCCC
GAGCCTTACC CCTTTATCCT GCCGCAGCAC CAACCTCAGT CTTTAGAGGT CATACAGCAA
GCGATTTTGG ATAAGAAACA AATTCGCTGC GATATCAAAA AATGGATCAA TGGCAAAATG
CATTGGCTGC ATTACAACCC CATTAATCCA CAAGGTATTT TGATCCGCGA TGGGGTGGCG
CTACTCGCCT TTACCATTGG CAGCTTTGAT AAGCGCCGCC ACCACAAACC GATTGGCTTA
CTGCGTAACG CGCAGCTATT GCCCAGCGCG GCGGTTAAGA GTGCCGATTT TGATATCAAT
AAAACCGCAC AGGGCTCGCG TGGCGAGAAG ATGCGTCTCG AACTGCTGCT CTCCGATAAG
GCGAGTTTTA TCATGCGCGA AGCCAAGTTT AGCGATAACC AGACCATGCA ATTACGCGAG
GATGGCCGCT TTTATGTAGT CGCAGAAGTC ACTGATACCC CAAAGCTGCG CGCAGCATTG
TGGGAAATGG CCGATACCGT GGAGGTGCTG GCACCGGTAA AACTGCGGGA GCACTTTGCC
GCCCTCAGCA AAAAAATGGC GGCGAAATAC CGTTAA
 
Protein sequence
MQPNFQRQVT LLSLIPRAPR KISVNELVER LANRTQDISK RSVQRDLKAM YEMGTFGLRL 
DDRNKPYGWS IESCWRGLNL DLMDQHMALA LTTLKRSASQ LMPPQSLQQL QPYFDRADQV
LASDPENPWL YWACRVAQLP EPYPFILPQH QPQSLEVIQQ AILDKKQIRC DIKKWINGKM
HWLHYNPINP QGILIRDGVA LLAFTIGSFD KRRHHKPIGL LRNAQLLPSA AVKSADFDIN
KTAQGSRGEK MRLELLLSDK ASFIMREAKF SDNQTMQLRE DGRFYVVAEV TDTPKLRAAL
WEMADTVEVL APVKLREHFA ALSKKMAAKY R