Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3744 |
Symbol | |
ID | 4254307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4476839 |
End bp | 4477834 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120389 |
Product | hypothetical protein |
Protein accession | YP_735864 |
Protein GI | 113972071 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCTA ACTTTCAACG CCAAGTGACA CTACTGAGCT TAATCCCGCG GGCGCCACGT AAAATCTCGG TGAACGAATT AGTCGAGCGG CTGGCAAACC GCACGCAGGA TATCAGTAAG CGTTCGGTGC AAAGGGATTT AAAGGCCATG TATGAAATGG GCACCTTTGG CTTACGCCTC GATGATAGAA ACAAGCCCTA TGGTTGGTCG ATTGAGTCCT GCTGGCGCGG GTTGAACCTA GATCTAATGG ACCAACATAT GGCGCTGGCT TTAACCACCT TAAAGCGCAG TGCCAGTCAG TTGATGCCAC CACAAAGCTT GCAACAACTA CAGCCCTACT TCGACAGGGC CGATCAGGTG CTGGCTAGCG ATCCCGAAAA CCCTTGGCTC TATTGGGCGT GCCGAGTCGC ACAGCTTCCC GAGCCTTACC CCTTTATCCT GCCGCAGCAC CAACCTCAGT CTTTAGAGGT CATACAGCAA GCGATTTTGG ATAAGAAACA AATTCGCTGC GATATCAAAA AATGGATCAA TGGCAAAATG CATTGGCTGC ATTACAACCC CATTAATCCA CAAGGTATTT TGATCCGCGA TGGGGTGGCG CTACTCGCCT TTACCATTGG CAGCTTTGAT AAGCGCCGCC ACCACAAACC GATTGGCTTA CTGCGTAACG CGCAGCTATT GCCCAGCGCG GCGGTTAAGA GTGCCGATTT TGATATCAAT AAAACCGCAC AGGGCTCGCG TGGCGAGAAG ATGCGTCTCG AACTGCTGCT CTCCGATAAG GCGAGTTTTA TCATGCGCGA AGCCAAGTTT AGCGATAACC AGACCATGCA ATTACGCGAG GATGGCCGCT TTTATGTAGT CGCAGAAGTC ACTGATACCC CAAAGCTGCG CGCAGCATTG TGGGAAATGG CCGATACCGT GGAGGTGCTG GCACCGGTAA AACTGCGGGA GCACTTTGCC GCCCTCAGCA AAAAAATGGC GGCGAAATAC CGTTAA
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Protein sequence | MQPNFQRQVT LLSLIPRAPR KISVNELVER LANRTQDISK RSVQRDLKAM YEMGTFGLRL DDRNKPYGWS IESCWRGLNL DLMDQHMALA LTTLKRSASQ LMPPQSLQQL QPYFDRADQV LASDPENPWL YWACRVAQLP EPYPFILPQH QPQSLEVIQQ AILDKKQIRC DIKKWINGKM HWLHYNPINP QGILIRDGVA LLAFTIGSFD KRRHHKPIGL LRNAQLLPSA AVKSADFDIN KTAQGSRGEK MRLELLLSDK ASFIMREAKF SDNQTMQLRE DGRFYVVAEV TDTPKLRAAL WEMADTVEVL APVKLREHFA ALSKKMAAKY R
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