Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3736 |
Symbol | |
ID | 4254299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4466383 |
End bp | 4466847 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120381 |
Product | RNA methyltransferase |
Protein accession | YP_735856 |
Protein GI | 113972063 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.607715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCATA TCGCACTCTA TGAGCCAGAA ATCGCACCCA ACACGGGTAA TATCATTCGC CTTTGCGCAA ACAACGGCAG CCAACTGCAT CTAATTGAGC CACTAGGGTT TGATTTTGAA GAGAAAAAAC TGCGCCGCGC GGGCCTAGAC TATGCCGATT TAACCAATGT GACTCGCCAT AAAAACTTCG ATGCCTTCCT CGAAGCCATG GCAGGCAAAC GCATTATGGC CTGTACCACT AAGGGCAGCC GCCCTCACAC TGAACTCAGT TTTGCCAAGG ATGACGTGCT ATTATTTGGC CCAGAAACCC GTGGGCTACC TATGCCAATT ATCGAGTCGA TCCCAACCGA GCAGCGATTA CGCATTCCGA TGGCGGCCAC CAGTCGCAGC CTCAATCTCT CCAATGCCGT GGCGATTATC AGCTACGAAG CCTGGCGTCA GCTCGGGTTT GAAGGCGCAA TTTAA
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Protein sequence | MFHIALYEPE IAPNTGNIIR LCANNGSQLH LIEPLGFDFE EKKLRRAGLD YADLTNVTRH KNFDAFLEAM AGKRIMACTT KGSRPHTELS FAKDDVLLFG PETRGLPMPI IESIPTEQRL RIPMAATSRS LNLSNAVAII SYEAWRQLGF EGAI
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