Gene Shewmr4_3736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3736 
Symbol 
ID4254299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4466383 
End bp4466847 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content52% 
IMG OID638120381 
ProductRNA methyltransferase 
Protein accessionYP_735856 
Protein GI113972063 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.607715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCATA TCGCACTCTA TGAGCCAGAA ATCGCACCCA ACACGGGTAA TATCATTCGC 
CTTTGCGCAA ACAACGGCAG CCAACTGCAT CTAATTGAGC CACTAGGGTT TGATTTTGAA
GAGAAAAAAC TGCGCCGCGC GGGCCTAGAC TATGCCGATT TAACCAATGT GACTCGCCAT
AAAAACTTCG ATGCCTTCCT CGAAGCCATG GCAGGCAAAC GCATTATGGC CTGTACCACT
AAGGGCAGCC GCCCTCACAC TGAACTCAGT TTTGCCAAGG ATGACGTGCT ATTATTTGGC
CCAGAAACCC GTGGGCTACC TATGCCAATT ATCGAGTCGA TCCCAACCGA GCAGCGATTA
CGCATTCCGA TGGCGGCCAC CAGTCGCAGC CTCAATCTCT CCAATGCCGT GGCGATTATC
AGCTACGAAG CCTGGCGTCA GCTCGGGTTT GAAGGCGCAA TTTAA
 
Protein sequence
MFHIALYEPE IAPNTGNIIR LCANNGSQLH LIEPLGFDFE EKKLRRAGLD YADLTNVTRH 
KNFDAFLEAM AGKRIMACTT KGSRPHTELS FAKDDVLLFG PETRGLPMPI IESIPTEQRL
RIPMAATSRS LNLSNAVAII SYEAWRQLGF EGAI