| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3730 |
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| Symbol | |
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| ID | 4254293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4460703 |
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| End bp | 4462040 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120375 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_735850 |
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| Protein GI | 113972057 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.421344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAG TTATTCAAAC GCTCAATGGC GCGATCGCAA CGCCTTATCA AGCGAATATT
ACCGTCCCTA ACTGGATGCT CAGCTCGATG GAACGAGTCA TGCAGTATTA TGTCGATAAG
AATCTTCGCC TCGATACGCT CTCCGCCGAC ATCATGCCCG CTCCGGTCGA AGGTAAAAAG
TACATGCTTT ATGCCCATGT GCCCTTCTGC CATACCTTGT GTTCTTACTG TACCTTCCAC
CGTTTTATGT TTAAGGAAGA CAAGGCGCGC GCTTACTTTA TCTCTCTGCG TAAAGAGATG
GAGATGGTCA AAGCCTTAGG CTATGACTTT GAATCTATGT ACATTGGCGG CGGCACCACC
ACAGTATTAG AAGACGAACT CGCCCGTACC ATTGAGCATG CCAAGACCCT ATTCCCAAGC
ATTAAAGAAG TATCTTGCGA GTCGGATCCA CAGCATTTAG ACAGCCCAGG CTTTAAGCAA
CTCAAGGGCT TAGTGGATCG TATGTCCATC GGCGTACAAA GCTTTAACGA TGACATTTTA
AAAATGACCG ACCGCCTCGA AAAATTCGGC ACAGGTCAGC AAACCTTCGA CAAGATCATG
GCGGCCAAAG AGCTGTTCCC CATTATCAAC GTCGACCTGA TTTTTGGCTT CCGCGGTCAA
ACCGATGAAG TGATCCAGCA CGACTTAGAC ATGGCCTCAC GCCTCGACCC CAGACAGATC
ACCACCTATC CGCTGATGAT CACGCACCAA ACGCGTAAGA GTGTTAAAGG TAAACTGGCA
GCGCCACAGG CGGATATGGC CAACCAATAT CGCCAGATCT TAAACCGTTT AAATGGTCAA
TATAATCAAT TGTCTGCATG GGCCTTTGGT AAGGCGAATG ACGAAGGCTT CGACGAATAT
GTTATCGATT ACGATGAGTA TTTAGGGGTG GGTTCAGGCT CATTTAGCTT CTTGAATGAC
ACTTTATACG TCAACACCTT CTCGCTGCGT AAATACCAAG AGCGGATCGC CGCTGGCAAG
ATGGGCGTAG AGCAACAGAA AAACTACAGC AAAAAGGATG TGATGCAGTA TCGCTTCCTG
CTGGGGATGT TCTCTGGCCG TCTATCGCGC AAATACTTCC GCGAAACCTT TGGCGTTAAC
TTAGACACAG CCCTGTTTAA GGAAATGACC TCGATGAAAC TGATTGGCGC CATCAAGAAC
GACCCCACAG ATCCCGATAA TCTGATCATC ACAGATAACG GTAAGATGAT GGGCCTGTTA
ATGATGAAAG AGTTCTACGC CGGCATGGAT AACGTGCGCG CCCAATTGCG TAAGCCACTC
AAGCCCTGCG ATATGTAA
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| Protein sequence | MSSVIQTLNG AIATPYQANI TVPNWMLSSM ERVMQYYVDK NLRLDTLSAD IMPAPVEGKK
YMLYAHVPFC HTLCSYCTFH RFMFKEDKAR AYFISLRKEM EMVKALGYDF ESMYIGGGTT
TVLEDELART IEHAKTLFPS IKEVSCESDP QHLDSPGFKQ LKGLVDRMSI GVQSFNDDIL
KMTDRLEKFG TGQQTFDKIM AAKELFPIIN VDLIFGFRGQ TDEVIQHDLD MASRLDPRQI
TTYPLMITHQ TRKSVKGKLA APQADMANQY RQILNRLNGQ YNQLSAWAFG KANDEGFDEY
VIDYDEYLGV GSGSFSFLND TLYVNTFSLR KYQERIAAGK MGVEQQKNYS KKDVMQYRFL
LGMFSGRLSR KYFRETFGVN LDTALFKEMT SMKLIGAIKN DPTDPDNLII TDNGKMMGLL
MMKEFYAGMD NVRAQLRKPL KPCDM
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