Gene Shewmr4_3725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3725 
Symbol 
ID4254288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4452973 
End bp4453542 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content51% 
IMG OID638120370 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_735845 
Protein GI113972052 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.945893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAA TGAAATTTTT GTGTGACACC AAGCGCTGCA TCGAATGTAA CGGCTGTGTC 
ACCGCATGTA AAAACGAAAA CGATTCCGCT CTCGAGTGGG GTATTCAACG CCGCCGCGTA
GTAACTATCA ACGATGGTCA ACCCGGTGAA GCTTCAATCT CTGTCGCCTG TATGCATTGC
TCAGACGCGC CATGTATGGC GGTTTGCCCA GCAAACTGCT TCTACAAAAC CGAAGACGGC
ATTGTGCTAC ACAACAAAGA TGCCTGTATT GGTTGCGGTT ATTGCTTGTA CGCCTGTCCA
TTTGGCGCAC CACAGTTCCC GAAAAAAGGT GCCTTTGGTA GCCGCGGTAA GATGGATAAA
TGTACCTTCT GTGCCGGCGG GCCAGAAGAA AACCACTCAG AGGCAGAGCG CCAAAAGTAC
GGTTCAAACC GTATTGCCGA AGGCAAACTG CCAATGTGCG CAGAACTATG TGCGACTAAG
GCCCTGTTAG CGGGTGATGC AGAAGTGGTT TCTAGCATCT TCCGTGAGCG TGTGGCTTAC
CGTGGCGCTA AAAACGCGGC TTGGAATTAA
 
Protein sequence
MATMKFLCDT KRCIECNGCV TACKNENDSA LEWGIQRRRV VTINDGQPGE ASISVACMHC 
SDAPCMAVCP ANCFYKTEDG IVLHNKDACI GCGYCLYACP FGAPQFPKKG AFGSRGKMDK
CTFCAGGPEE NHSEAERQKY GSNRIAEGKL PMCAELCATK ALLAGDAEVV SSIFRERVAY
RGAKNAAWN