| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3701 |
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| Symbol | |
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| ID | 4254264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4416955 |
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| End bp | 4417581 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638120343 |
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| Product | pilus assembly protein, PilO |
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| Protein accession | YP_735821 |
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| Protein GI | 113972028 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.318823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG ATCTAAGTCA GTTTAATGAT ATCGATTTTG AGAATATCGG CGGTTGGCCA
AATCAAGTCA AAGTTTTCTT CGCCGTTTTA TTAGCACTCT GCGTGTTTGC CGCGGGTTAT
TTTTTGGTAG TTTCTGATGC CATCGATGTT TATAACGCTG AGCAAAGAAA GGAAGAGCAG
CTAAGAGAAG ATTTTAAAAC CAAATACCAG CTGGCCGCGA ACCTTAAATT GTACCGTGAA
CAGTTGGCTG TAATGGAGGA GCAATTTGCC GAGTTACTTA AAATGCTGCC CTCTGAAAAT
GAAATGCCAG GGCTGCTCGA TGACTTAACC TTTGTGGCAA CCGACGCTGG ATTACGGATT
AAGAGTTTAA ATTGGGAACC TGAAATTCAG CGGGATTTCT ACATTGAGTT TCCGATCAAA
ATGTCTGTCA CGGGTGACTA TCATCAAATA GGCAATATGG TCAGTGGCGT GGCTAAGTTG
CCTCGTATCG TCAGCTTGCA CGATTTCACC ATTAAGCGTG ACGAGAGCGG TAATCTAGCC
ATGGATATTC TTGCTAAAAC CTATCGCTTT AAAGAAGGGG CTGAATTACC GCCCGAGAAG
CCTGCCAATA ACAAGGGGAA GAAATAA
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| Protein sequence | MKLDLSQFND IDFENIGGWP NQVKVFFAVL LALCVFAAGY FLVVSDAIDV YNAEQRKEEQ
LREDFKTKYQ LAANLKLYRE QLAVMEEQFA ELLKMLPSEN EMPGLLDDLT FVATDAGLRI
KSLNWEPEIQ RDFYIEFPIK MSVTGDYHQI GNMVSGVAKL PRIVSLHDFT IKRDESGNLA
MDILAKTYRF KEGAELPPEK PANNKGKK
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