| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3692 |
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| Symbol | |
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| ID | 4254255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4408707 |
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| End bp | 4409384 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120334 |
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| Product | ribulose-5-phosphate 3-epimerase |
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| Protein accession | YP_735812 |
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| Protein GI | 113972019 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCAT TTTTAATTGC TCCATCGATT TTATCCGCCG ATTTCGCCCG TTTAGGGGAT
GACGTTAAAG CCGTGTTAGA TGCAGGGGCT GACGTAGTGC ATTTTGATGT GATGGATAAC
CACTATGTGC CCAACTTAAC CATTGGCCCT ATGGTGTGCA AAGCGTTACG TGACTATGGC
ATCACGGCCG ATATCGATGT GCATTTAATG GTTAAGCCTG TTGATCGTAT CGTGCCTGAT
TTTGCCAAGG CGGGTGCGTC TATTATTACT TTCCATCCCG AGGCCTCTGA GCATATCGAC
CGCACCCTGC AACTGATTAA AGAATCGGGT TGTAAAGCGG GTTTAGTGTT TAACCCGGCA
ACACCGCTGC ACTATCTCGA CCATGTAATG GATAAGTTGG ACGTGATTCT GCTGATGTCG
GTCAACCCAG GTTTTGGAGG CCAATCCTTT ATTCCTTCGA CTTTAGATAA ATTACGCCAA
GTGCGTGAGC GTATCGATGC CAGTGGTTTC GATATTCGTT TAGAAGTCGA TGGTGGCGTC
AAAGTGGATA ACATTGCCGA AATTGCCGCC GCAGGCGCCG ATATGTTTGT CGCAGGTTCT
GCCATTTTCG GTAAGCGAGA CTATAAAGCC GTCGTCGACG AGATGCGCGC CGAGTTAGCG
AAAGTTGAGG TCAAATAA
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| Protein sequence | MRPFLIAPSI LSADFARLGD DVKAVLDAGA DVVHFDVMDN HYVPNLTIGP MVCKALRDYG
ITADIDVHLM VKPVDRIVPD FAKAGASIIT FHPEASEHID RTLQLIKESG CKAGLVFNPA
TPLHYLDHVM DKLDVILLMS VNPGFGGQSF IPSTLDKLRQ VRERIDASGF DIRLEVDGGV
KVDNIAEIAA AGADMFVAGS AIFGKRDYKA VVDEMRAELA KVEVK
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