| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3691 |
|---|
| Symbol | |
|---|
| ID | 4254254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 4408024 |
|---|
| End bp | 4408707 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638120333 |
|---|
| Product | phosphoglycolate phosphatase |
|---|
| Protein accession | YP_735811 |
|---|
| Protein GI | 113972018 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGAAC AGATTAAAGC GATTGCCTTT GATCTCGACG GCACACTGAT TGACAGTGTG
CCCGATCTTG CAGTCGCGAC TCAGGCGTCA CTCGCCGAAT TAGGTTTAGC AACTTGTACC
GAGGCACAGG TGAGAACTTG GGTGGGCAAT GGGGCAGAAA TGCTGATGCG CCGCGCGATG
AGCCACGCTT TAGGTACAGA CGTTGAGCAA ACGGCATTGG ATGAGGCTAT GCCTATCTTT
ATGCATCACT ATCAAGAAAA TCTTGAGAAG CACAGTGCAC TCTATGCCGA TGTGCATCAA
GTGCTGCAAA TCCTATTTGA TGCAGGATTT AAGCTAGCTG TGGTGACCAA CAAGCCCTAT
CGCTTTACCT TGCCCTTGCT TGAAGCCTTT AAGATTAATG ACTTCTTTAG CATAGTGCTT
GGCGGTGATT CGCTGGCGAA GATGAAGCCA GATCCATTAC CGCTACAGCA TCTATTAGCC
GAATGGCAAC TCGATAAAAG TGAGTTGTTG ATGGTGGGCG ATTCTAAAAA TGACATTTTA
GCGGCGAAAG CGGCGGGTGT TGCATCAATC GGCTTGACCT ATGGCTACAA CTACGGTGAA
GATATTGGGC TCACTGGCCC TGACGCTGTA TGCGAGCAGT TTGTCGAGAT CCTGCGCTGG
CTAAATCTCG CTCAGCCAGT TTAA
|
|---|
| Protein sequence | MREQIKAIAF DLDGTLIDSV PDLAVATQAS LAELGLATCT EAQVRTWVGN GAEMLMRRAM
SHALGTDVEQ TALDEAMPIF MHHYQENLEK HSALYADVHQ VLQILFDAGF KLAVVTNKPY
RFTLPLLEAF KINDFFSIVL GGDSLAKMKP DPLPLQHLLA EWQLDKSELL MVGDSKNDIL
AAKAAGVASI GLTYGYNYGE DIGLTGPDAV CEQFVEILRW LNLAQPV
|
|---|
| |