Gene Shewmr4_3683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3683 
Symbol 
ID4254246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4400550 
End bp4401395 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content52% 
IMG OID638120325 
Producthypothetical protein 
Protein accessionYP_735803 
Protein GI113972010 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAA GCGTCGCACT CTATATTGTT CCCACTCCCA TTGGTAACTT GGGGGACATG 
AGCCCACGTG CTATCGAAGT GCTCACTCAG GTCGCATTGA TTGCCTGTGA AGATACGCGC
CACAGCGGCA AGTTATTGAG TCATTTTGGT ATTTCTACCA AAACTATCGC ATTGCATGAC
CATAACGAGC GTGCCCGCGC CCAATGGATT GTAGATCAAC TGGCCGCAGG GCAATCGATA
GCGCTGATTT CCGATGCGGG CACGCCGCTG ATTTCGGACC CTGGCTATCA CTTAGTCTCC
CATGTGCGCC AGTCGGGTTT TAGAGTGGTT CCATTGCCAG GCCCTTGCGC CGCGATTACC
GCATTAAGCG CGTCGGGTTT ACCGTCGGAT CGTTTCGCCT TCGAAGGTTT CTTACCTTCT
AAAGAGAAGG CGCGCGCCGA TAAGTTACTC GAGCTCAAGG AAGATCCGCG TACGCTGATT
TTTTATGAAT CACCGCACCG CATCGAGCAT AGCCTGACGA CTATGGCCCA AGTCTTAGGT
GACGAACGCC AAGTGGTCAT GGCGCGTGAA GTGACTAAAA CCTTCGAAAC CTTCCTCTCT
GGCCCTGTGG CCGAGGTGTT GGCCACGGTC AGCTCAGATC CTAACCAGCA AAAAGGTGAG
ATAGTGCTGA TGGTGCATGG ACACCGCGCT GCGGACGATG ATGAAGCTAT TCCCACAGTT
GCCATCAACA CTTTGAAATT ACTCTGTGAA GAATTGCCCC TCAAAAAGGC CGCCGCCATT
GCCGCGCAAA TTCACGGTCT TAAAAAGAAT GCTCTGTATA AGTTCGGCTT AGAGTCGGAT
TTATAA
 
Protein sequence
MDQSVALYIV PTPIGNLGDM SPRAIEVLTQ VALIACEDTR HSGKLLSHFG ISTKTIALHD 
HNERARAQWI VDQLAAGQSI ALISDAGTPL ISDPGYHLVS HVRQSGFRVV PLPGPCAAIT
ALSASGLPSD RFAFEGFLPS KEKARADKLL ELKEDPRTLI FYESPHRIEH SLTTMAQVLG
DERQVVMARE VTKTFETFLS GPVAEVLATV SSDPNQQKGE IVLMVHGHRA ADDDEAIPTV
AINTLKLLCE ELPLKKAAAI AAQIHGLKKN ALYKFGLESD L