| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3679 |
|---|
| Symbol | |
|---|
| ID | 4254242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 4395299 |
|---|
| End bp | 4396012 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638120321 |
|---|
| Product | cytoplasmic chaperone TorD family protein |
|---|
| Protein accession | YP_735799 |
|---|
| Protein GI | 113972006 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGGCT TGTGCCCCTC ACTCTTTCTA CCTGATAAGA GAAGAATTAT GTCAAAGATA
AAAGCGGATG ATTACCTGAC ATGGGGAGCT ATCGCTAAGG TTCTGCATAA TATTTTATAT
ACCTACCCAG AAGCTCCCTT AATCGACAAT TTTAAGCAAG AAGAACTCCA CATCAGTTGG
CCTCAACTTG TTGATTCCGA GTATGAAAAA CAGGGGCGTA CTTATTTAAA GCGTTATTTA
ACAAACTGGG AAAGCACAGA GGCGCAGCTG ATCGAGTTAA AAGTGGATTA CGGGCAATTG
TTTTTTGGTC CAAGCGACCC TAAAGCGGCA CCTTGGGGGT CAGTGTATAC CGGGGAAGAA
CAGTCATTAA ATGGTGATTC GACGCAAAAA CTGATGGCCT TCTATAAGGC ACATAATATC
GAATTCACAT TAGAGAGAAA CGAGCCGATA GATCATATTG GCTTGATTCT GCTGACATTA
GAATATTTAT TTACCCAATT AGCGGCCACG CCCGAAGACA AAAATATCCT CGGAACCTGC
ACGCTACTAT TACAACAGCA TCTACTGCCC TGGGCGGATC GCTGCCTCGA ATTAGCGGAG
CAACATGCCG ACAGCGAATT TTATAGAGGT ATTGCTATCT TGAGCAGAGT CTATCTCGAG
CATGTATCTC AACAACTCGG GATCATAACG CAGCAAACCA AACTCTTTCG TTAA
|
|---|
| Protein sequence | MGGLCPSLFL PDKRRIMSKI KADDYLTWGA IAKVLHNILY TYPEAPLIDN FKQEELHISW
PQLVDSEYEK QGRTYLKRYL TNWESTEAQL IELKVDYGQL FFGPSDPKAA PWGSVYTGEE
QSLNGDSTQK LMAFYKAHNI EFTLERNEPI DHIGLILLTL EYLFTQLAAT PEDKNILGTC
TLLLQQHLLP WADRCLELAE QHADSEFYRG IAILSRVYLE HVSQQLGIIT QQTKLFR
|
|---|
| |