Gene Shewmr4_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3678 
Symbol 
ID4254241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4394627 
End bp4395286 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content49% 
IMG OID638120320 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_735798 
Protein GI113972005 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR02951] DMSO reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAG AAACACAATA TGGTTTTTAC TTTGACAGCA GCAAATGTAC TGGATGTAAG 
GCGTGCCATA TCGCCTGTAA AGACCGCATG ACGGGACTTA TCCGTGCAAA TGATGGCAAC
GGTAGCGTTG CCAATCTTCC TGGGGTGCTG TGGCGCCGCG TCACCGAATA CGGTGGTGGC
AACTGGAGCC AGAATGCCGA TGGAAGTTTT GAGCAAAACG TTTTTGCATA TTACACATCA
ATAGGTTGTA ACCATTGCAG CGAACCCGTT TGCGTTAAAG CCTGCCCGAC GGGTGCCATG
CATAAACGCA AAGACAACGG CCTAGTGTTA GTGGAGTCAT CCATCTGTAT TGGCTGTGGC
AGCTGCGCAA GAGCCTGTCC CTATGACGCG CCACAATTAG ATACTCAGCG TAAAGTCATG
ACCAAGTGTG ATGGTTGTTA TGATCGACTC GCCGACGGCA AAAAACCGAT TTGCGTCAAT
GCCTGTCCAT TGCGGGCACT CGATTTTGAC ACTATGGAAA ACCTAAAAGC CAAATATGGT
GAAGGTGACG GGCACATTGC GCCGCTGCCC TCGTCATCTA TCACCTCTCC CAATCTGATT
GTCAAAAAGA ACCCAAATGC ACAATCGGGT GGGCAAGTGC TGAATTGGTC TGAAATTTAA
 
Protein sequence
MTQETQYGFY FDSSKCTGCK ACHIACKDRM TGLIRANDGN GSVANLPGVL WRRVTEYGGG 
NWSQNADGSF EQNVFAYYTS IGCNHCSEPV CVKACPTGAM HKRKDNGLVL VESSICIGCG
SCARACPYDA PQLDTQRKVM TKCDGCYDRL ADGKKPICVN ACPLRALDFD TMENLKAKYG
EGDGHIAPLP SSSITSPNLI VKKNPNAQSG GQVLNWSEI