| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3676 |
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| Symbol | |
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| ID | 4254239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4390074 |
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| End bp | 4392077 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120318 |
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| Product | outer membrane protein |
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| Protein accession | YP_735796 |
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| Protein GI | 113972003 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTA AATTGAATTT AATCACCATT GGACTGCTTG CCGCCTCTGC AAGCGTTAAC
GCAGCAGACT TTTCGGTTAA GCAAGCCAAT ACCAGCCAGG TCAACACCAG CGCCTATCAA
TGTAAGGCCT GTACTGTAAA GCAAGGCTAC CAAGGCGAAG TTAACGCCAA TGTTGGCTGG
GCAAGCAGTG ACGATATCCA CTCAGGTAAT AGCTTTGGCG ACAGTGATGC GGGCTGGCGT
GGCAGTGTCG GTGGCGATGT GAGTTATCGA CAGGGTGAAT ACCACGCAGC GATGCAAGCC
GATGAACTCG GTTCGGACAA CGGTTATCTG CACCTCGAAG CCGCCAAAAA CAATCTGGGC
GGCGTCCAAC TCGATTACAG CCTGCTGACC CGTTATGACG CCACGGCCCA AACCCAGCTT
TGGCATAACA ATGGATTGCT GCGACCCGAT AGCCACACTC GCTCCCTTGA CCTCGAATTA
CAGCGTGAAA AAGTCGGTAT CGGCCTTGAG GGCGAGTTAG ATGCACTGCT TAACGGCCTT
AAGGGTTATA TCAACTATGA CCACGAGGAT AAAACCAGCA ATCGTCGTAG CAGTTTATTA
GCCAACTCAG GCCCAATAAA CTTTGCCTTA CCTGTGGATG CGACCACTCA AAATATCAAT
GCCGGTATCA GCATCGACCA GCACCAATGG CAGAGTGAGC TGGCCTATAA CGGCAGTTAT
TACCGCAACC ACATTAATCA CTTAAGTCTG CCCTATGCCG ACAATGTGTA TGCCGCCACC
CCAGATAACG ATGCCCATCA AGTCTCGTTG ACAGGCCAAT ATCTGCTCGG CAGCAATGTG
ATTAACGGCC GTCTTGCCAC AGGCCGAATG ATCCAGGATG ACAATCTAAT CCAAATCAGC
GGTAATCCTC TGCAAAGCTG GGACGGCGAA GTGGAGACCT TAGACGCGCG TATCGGCTTT
AGCAGTATGC TGAGCCCCCG CTGGCGCCTG AACGGTCAAC TGGATTACAG CGACCGCGAC
AATAAAAGCT CTACCTGGGA TTTTGCCCAA TTTGAAGTCG ACAATGTCAG CGGTGCCTTT
AAGCAAAACG TGGCGATGGA TATTCAACGC ACCAACTTCA AACTGCAGAG TAGCTACCGT
TTCAACAGCG ACTATCGCTT ACTCGGCGGT TTTGATTACA AAGCGGTTGA ACGTAACTAT
ACCGAGCGTG AAGAGACTGA GGACAGTGCG CTGTGGGCTA AGTTGAATAT CCGCGCCATC
CCTAAAACTG TGGTAGACCT TAAAGCCAGT TACGAAACCC GTGATGGCTC AACCTATGAC
AGTCTAGAAG CCACCTCCAT CGAAGAAAAC CCGCTGCTAC GCAAGTTTTA CCTTGCGGAC
AGAAACCGTA ATGGACTCGA ACTCAGGGTT AATCATACTC CCCTGCAATG GCTGACCCTT
GATTTCGATG CCCATTACAA CAACGACGAC TACGATAACA CCACCATCGG CTTAACTGAG
GTGAAGGACT ACGGCTACAA CGTACAACTC AGTGCCCAGC TGTCCAACAG ACTCAACGTT
TTTGCTAGCG CAGGGCAACA GTGGATTGAG TCTGACATGG CAGGAAGCCA AGCTTATGCC
TCCCCAGATT GGTACACCAA TGTCGACGAT GAGTTTATCG ACCTCAATAT TGGGTTTACC
TACGACGGAC TGATGGATGA CCGCTTAAGC ATTGGGGGGA ATTACCAATT TGCGAACTCC
GCAAGTGACA CCCTCATCAC CACAACCACA GACCAACCTT ACGGTGATTA CTACTCCTAC
AGCCACAATA TTGAGCTGTA TGGCCGTTAT GCCCTGAACG AGCGCATGGG ACTCAAGCTG
AGCTACCAGT ACGAACGTTA CTACGACACT GACTACGCCG AGGTCAGCCC CTATGCAGTC
CCAGGATTAG TAACCTTGGG TGAGCTTAAT CATAACTACA ACGCGCATCT GCTGATGTTG
ACCTTCAGCT ACATGCTGCC TTGA
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| Protein sequence | MKFKLNLITI GLLAASASVN AADFSVKQAN TSQVNTSAYQ CKACTVKQGY QGEVNANVGW
ASSDDIHSGN SFGDSDAGWR GSVGGDVSYR QGEYHAAMQA DELGSDNGYL HLEAAKNNLG
GVQLDYSLLT RYDATAQTQL WHNNGLLRPD SHTRSLDLEL QREKVGIGLE GELDALLNGL
KGYINYDHED KTSNRRSSLL ANSGPINFAL PVDATTQNIN AGISIDQHQW QSELAYNGSY
YRNHINHLSL PYADNVYAAT PDNDAHQVSL TGQYLLGSNV INGRLATGRM IQDDNLIQIS
GNPLQSWDGE VETLDARIGF SSMLSPRWRL NGQLDYSDRD NKSSTWDFAQ FEVDNVSGAF
KQNVAMDIQR TNFKLQSSYR FNSDYRLLGG FDYKAVERNY TEREETEDSA LWAKLNIRAI
PKTVVDLKAS YETRDGSTYD SLEATSIEEN PLLRKFYLAD RNRNGLELRV NHTPLQWLTL
DFDAHYNNDD YDNTTIGLTE VKDYGYNVQL SAQLSNRLNV FASAGQQWIE SDMAGSQAYA
SPDWYTNVDD EFIDLNIGFT YDGLMDDRLS IGGNYQFANS ASDTLITTTT DQPYGDYYSY
SHNIELYGRY ALNERMGLKL SYQYERYYDT DYAEVSPYAV PGLVTLGELN HNYNAHLLML
TFSYMLP
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