Gene Shewmr4_3672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3672 
Symbol 
ID4254235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4384935 
End bp4386155 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content52% 
IMG OID638120314 
Producthypothetical protein 
Protein accessionYP_735792 
Protein GI113971999 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein
[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATAACG AACAGTTTCT CGAAAAGCGT AAATTTATCA TTAAGCTAGG CAAGGCTTTA 
CATAAGTTTG GCACACCCGC TTACCGTCTT GAAACCCATT TGCAAACCGT CTCACGGACG
CTCGGAATCG AAGGTTATTT TTTAATCTCG CCGACCTCGA TGACCTTCGT ATTACAACAC
GATACCGATC AAGAATATAA CCATGTTGCG CGGGTTAAAC CCGGCGAATT GGATTTAGGC
TCCCTCGCTC GCACCGATGA ACTGGTAGAT GAGCTCACCT CTGGTAAACG CACACTCACC
GAAGCCTTAG ACAGGCTAGA GGAAATAGCC AACAAACCCA ACCCCTACGG CCCAGCATTA
ACCTGTTTCT CCTTTGGCAC CTCGGCGGCC GCCTTTGCCA TGTTGATGGG CACGGGTTGG
AACGATGTCT TTTGGTCAGG CTTGTTAGGC TTGCTAGTCT ATGGTTTTGT GTACCGCGCC
GAGCGTTCGA CGCGCATGGC AGAAGTGTTA GAGCCCTTCG CGACGATTGT TTGCGCCATT
GCCGCCTGCG CCATTGCCCG CATCGACCCC AATATTAATA TTCCCGTGGT GATCCTCTCC
TCCATCATCA TCTTTATTCC CGGCTTAGCC TTAACCTTAG GGTTGGCAGA ACTGGCGGCA
CGCGACCTGA TCTCGGGCAC AGCGCGGATT ATGGACGCTA GTATGTTGTT GTTTAAGCTG
TACTTTGGCG CAGTGCTGGG GATGGCGATT GGTAAAGCCT TCTTCGGTGA AGCCATTCAT
ATCGAGCCTG AGGGCTTACC ACGCTGGGCG ATTTGGTCGG CGGTGCCCAT CCTGTCGATG
GCGTTGGTGT TTATCTTTAA GGCACGAATG CAAGATTCAC CTTGGGGCGT ACTGGCGGGG
ATAGTGGCAT TCTTCTCCGC CATGTTAGGC GGACACTTTT TTGGGGATTC TGTGGGGATC
TTCTTCGGTG CCTTGGCGGT AGGGGTCTAT TCCAATCTCT ATGCCCGTTG GATGAAAGCG
CCCGCCTCGA TTGCACTGCT GCAAGGTATT GTGATCTTAG TGCCCGGCAG TAAAACCTAC
ATAGGGCTGA ACGCGCTGAT CTCCGGCGAA ACCATGCTCA ACCAATCCCA TATTGGATCG
CAGATCTTTT TGATCTTTAT GTCGCTTATC GCTGGACTAA TTTTTGCCAA CGTCGTGGTA
CCACCAAGAC GTACGCTGTA A
 
Protein sequence
MDNEQFLEKR KFIIKLGKAL HKFGTPAYRL ETHLQTVSRT LGIEGYFLIS PTSMTFVLQH 
DTDQEYNHVA RVKPGELDLG SLARTDELVD ELTSGKRTLT EALDRLEEIA NKPNPYGPAL
TCFSFGTSAA AFAMLMGTGW NDVFWSGLLG LLVYGFVYRA ERSTRMAEVL EPFATIVCAI
AACAIARIDP NINIPVVILS SIIIFIPGLA LTLGLAELAA RDLISGTARI MDASMLLFKL
YFGAVLGMAI GKAFFGEAIH IEPEGLPRWA IWSAVPILSM ALVFIFKARM QDSPWGVLAG
IVAFFSAMLG GHFFGDSVGI FFGALAVGVY SNLYARWMKA PASIALLQGI VILVPGSKTY
IGLNALISGE TMLNQSHIGS QIFLIFMSLI AGLIFANVVV PPRRTL