Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3672 |
Symbol | |
ID | 4254235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4384935 |
End bp | 4386155 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120314 |
Product | hypothetical protein |
Protein accession | YP_735792 |
Protein GI | 113971999 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein [COG3610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATAACG AACAGTTTCT CGAAAAGCGT AAATTTATCA TTAAGCTAGG CAAGGCTTTA CATAAGTTTG GCACACCCGC TTACCGTCTT GAAACCCATT TGCAAACCGT CTCACGGACG CTCGGAATCG AAGGTTATTT TTTAATCTCG CCGACCTCGA TGACCTTCGT ATTACAACAC GATACCGATC AAGAATATAA CCATGTTGCG CGGGTTAAAC CCGGCGAATT GGATTTAGGC TCCCTCGCTC GCACCGATGA ACTGGTAGAT GAGCTCACCT CTGGTAAACG CACACTCACC GAAGCCTTAG ACAGGCTAGA GGAAATAGCC AACAAACCCA ACCCCTACGG CCCAGCATTA ACCTGTTTCT CCTTTGGCAC CTCGGCGGCC GCCTTTGCCA TGTTGATGGG CACGGGTTGG AACGATGTCT TTTGGTCAGG CTTGTTAGGC TTGCTAGTCT ATGGTTTTGT GTACCGCGCC GAGCGTTCGA CGCGCATGGC AGAAGTGTTA GAGCCCTTCG CGACGATTGT TTGCGCCATT GCCGCCTGCG CCATTGCCCG CATCGACCCC AATATTAATA TTCCCGTGGT GATCCTCTCC TCCATCATCA TCTTTATTCC CGGCTTAGCC TTAACCTTAG GGTTGGCAGA ACTGGCGGCA CGCGACCTGA TCTCGGGCAC AGCGCGGATT ATGGACGCTA GTATGTTGTT GTTTAAGCTG TACTTTGGCG CAGTGCTGGG GATGGCGATT GGTAAAGCCT TCTTCGGTGA AGCCATTCAT ATCGAGCCTG AGGGCTTACC ACGCTGGGCG ATTTGGTCGG CGGTGCCCAT CCTGTCGATG GCGTTGGTGT TTATCTTTAA GGCACGAATG CAAGATTCAC CTTGGGGCGT ACTGGCGGGG ATAGTGGCAT TCTTCTCCGC CATGTTAGGC GGACACTTTT TTGGGGATTC TGTGGGGATC TTCTTCGGTG CCTTGGCGGT AGGGGTCTAT TCCAATCTCT ATGCCCGTTG GATGAAAGCG CCCGCCTCGA TTGCACTGCT GCAAGGTATT GTGATCTTAG TGCCCGGCAG TAAAACCTAC ATAGGGCTGA ACGCGCTGAT CTCCGGCGAA ACCATGCTCA ACCAATCCCA TATTGGATCG CAGATCTTTT TGATCTTTAT GTCGCTTATC GCTGGACTAA TTTTTGCCAA CGTCGTGGTA CCACCAAGAC GTACGCTGTA A
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Protein sequence | MDNEQFLEKR KFIIKLGKAL HKFGTPAYRL ETHLQTVSRT LGIEGYFLIS PTSMTFVLQH DTDQEYNHVA RVKPGELDLG SLARTDELVD ELTSGKRTLT EALDRLEEIA NKPNPYGPAL TCFSFGTSAA AFAMLMGTGW NDVFWSGLLG LLVYGFVYRA ERSTRMAEVL EPFATIVCAI AACAIARIDP NINIPVVILS SIIIFIPGLA LTLGLAELAA RDLISGTARI MDASMLLFKL YFGAVLGMAI GKAFFGEAIH IEPEGLPRWA IWSAVPILSM ALVFIFKARM QDSPWGVLAG IVAFFSAMLG GHFFGDSVGI FFGALAVGVY SNLYARWMKA PASIALLQGI VILVPGSKTY IGLNALISGE TMLNQSHIGS QIFLIFMSLI AGLIFANVVV PPRRTL
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