Gene Shewmr4_3670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3670 
Symbol 
ID4254233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4381823 
End bp4384168 
Gene Length2346 bp 
Protein Length781 aa 
Translation table11 
GC content53% 
IMG OID638120312 
Producthypothetical protein 
Protein accessionYP_735790 
Protein GI113971997 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTTG AATCCACACT GTTTAGCCAT CCCAAGTATT GGGCCGAGTC CTTCGGCACA 
GCGCCTTTCT TACCTATGTC TCGCAAGGAG ATGGAGAAAT TAGGCTGGGA CAGCTGTGAC
ATTATTATTG TCACTGGTGA CGCCTATGTG GACCACCCAA GCTTTGGCAT GGCGGTCATT
GGCCGGATGT TAGAAGCCCA AGGCTACCGT GTCGGGATTA TTTCTCAGCC CGATTGGTCA
AGCAAAGATG CCTTTATGCA GCTTGGTCGC CCGAATCTGT TTTTTGGTGT CACCGCCGGC
AATATGGATT CGATGATCAA CCGTTACACC GCCGACCGTC GTATCCGCAG CGATGATGCT
TATACTCCTG GCGATGTGGG CGGTAAGCGC CCCGACCGTG CTGTGACGGT TTATACCCAA
CGTTGTAAAG AAGCCTTTAA AGATGTGCCA GTGATTATTG GCGGCATAGA GGCGAGCCTG
CGCCGTATCG CGCACTATGA TTATTGGTCG GACAAAGTCC GTCGCAGTGT GATTTTCGAT
GCCAAGGCCG ACATCTTGAT GTACGGCAAC GCCGAGCGTC CGCTGGCCGA AGTGGCGCGT
CGTTTAGCGG CGGGTGAAGC CATTGGGGAT ATTCAGGATG TGCGTGGCAC AGCCGTTATC
CGTAAAGAGC CTATGCCCGA GTGGCGTGGG ATGGATTCTC GCAAGATAGA TCAACTGCAT
AAGATCGATC CTATCCCGAA CCCCTATGGC GCCGACGATG TGGGCTGTGC CAATTTATCT
GGCCCATCGG ATGTTAAAAT TTTCGATAAC GATGCGCCAA AACCCATCAG TGTGCAGCCG
CCACGCCCTA AGCCTTGGGA TAAAACCTAT GTGCTGCTGC CAGCCTTTGA AAAGGTCTCT
GAGGACAAAT ACTTATACGC CCATGCTTCG CGGATTTTGC ACCAAGAGCA AAACCCGGGT
TGCGCGCGAG CGCTGTTCCA GCCCCACGGT GACCGTGGTG TGTGGGTGAA CCCACCTGCT
TGGCCGCTCA ATACCGACGA GATGGATGCC GTGTTCGATT TACCCTATCA ACGGGTACCG
CATCCTGCCT ACGGTAAGGA CAAAATCCCC GCCTATGACA TGATCAAAAC CTCGATCAAC
ATCATGCGCG GTTGCTTTGG TGGCTGTTCA TTCTGCTCGA TTACCGAGCA TGAAGGCCGG
ATTATCCAGA GCCGTTCGCA AGAATCAATT ATCAAAGAAA TCAAAGATAT TCAGGATAAG
GTTCCCGGCT TTACTGGGGT GATTTCTGAC TTAGGCGGCC CCACCGCCAA CATGTATCGC
CTCGGCTGTA CCAGTGAAAA AGCGGAGAAA ACCTGTCGCC GTTTATCCTG CGTGTATCCA
TCGATTTGCG GCCATTTAGG CACAGATCAT AAACACACTA TCGACTTGTA CCGCGCCGCT
CGTGCCGTGC CCGGCATTAA GAAAATCTTG ATTGCTTCGG GCGTGCGTTA TGACTTAGCG
ATTGAAGATC CGGCCTATGT TAAAGAGTTG GTCCAGCACC ATGTGGGCGG CTATTTGAAA
ATCGCCCCTG AGCATACCGA AGAAGGGCCG CTCAGCAAGA TGATGAAACC CGGCATGGGC
GCCTACGATA AGTTTAAAGA GCTGTTCGAC AAGTACTCTA AGGAAGCGGG TAAAGAACAG
TTCCTGATCC CTTATTTTAT TTCGGCGCAT CCGGGCACGA CCGACGAGGA TATGCTCAAC
CTCGCGCTCT GGTTGAAGGA GCGTAAGTTT AAGCTCGACC AAGTGCAAAA CTTCTATCCA
TCGCCAATGG CAAACGCGAC GACCATTTAT CACACTGAGT TGAACTCGCT GAAAAACGTC
AAGCACACCA GTGAAGTGGT GCCCGTGCCG AAGAAGGGCC GCCAACGCCG CCTGCATAAG
GCGCTGCTGC GTTACCACGA CCCAGCGGGT TGGCCTATCA TCCGCGAAGG TTTGATTGCC
ATGGGACGTG AAGATTTGAT TGGTAACAGT CCTAATCATC TCGTTCCACC AGAAGGGCGC
AACGAACGTG GCCAGAAATG GATGAAGGAT GCTAACCAAG GGCAAAAAGC CCTGACGCGT
TTCTCGGGCA ATCAGTTCGA TGAGCGTAAG GGTAAAGGCG ATGCCAAGGG CAAACCGAGC
GCAAGTAAGC CTAAGGGACC TAAGTCTGGG GCGAATGCAA CGCAAGGTCA GCAGCCTAAG
AGCAGCCGTC CGGGAGCTAA GGCGCCTTTT GGTCAGTCGG GCTTTAAGGG AAAATCTGAG
CAGGGTAAGG CTGGCCACCA AGGTCGCGGA AACAAAGCCT CTTCAGGGCG TCAGCACGCT
AAGTAA
 
Protein sequence
MQVESTLFSH PKYWAESFGT APFLPMSRKE MEKLGWDSCD IIIVTGDAYV DHPSFGMAVI 
GRMLEAQGYR VGIISQPDWS SKDAFMQLGR PNLFFGVTAG NMDSMINRYT ADRRIRSDDA
YTPGDVGGKR PDRAVTVYTQ RCKEAFKDVP VIIGGIEASL RRIAHYDYWS DKVRRSVIFD
AKADILMYGN AERPLAEVAR RLAAGEAIGD IQDVRGTAVI RKEPMPEWRG MDSRKIDQLH
KIDPIPNPYG ADDVGCANLS GPSDVKIFDN DAPKPISVQP PRPKPWDKTY VLLPAFEKVS
EDKYLYAHAS RILHQEQNPG CARALFQPHG DRGVWVNPPA WPLNTDEMDA VFDLPYQRVP
HPAYGKDKIP AYDMIKTSIN IMRGCFGGCS FCSITEHEGR IIQSRSQESI IKEIKDIQDK
VPGFTGVISD LGGPTANMYR LGCTSEKAEK TCRRLSCVYP SICGHLGTDH KHTIDLYRAA
RAVPGIKKIL IASGVRYDLA IEDPAYVKEL VQHHVGGYLK IAPEHTEEGP LSKMMKPGMG
AYDKFKELFD KYSKEAGKEQ FLIPYFISAH PGTTDEDMLN LALWLKERKF KLDQVQNFYP
SPMANATTIY HTELNSLKNV KHTSEVVPVP KKGRQRRLHK ALLRYHDPAG WPIIREGLIA
MGREDLIGNS PNHLVPPEGR NERGQKWMKD ANQGQKALTR FSGNQFDERK GKGDAKGKPS
ASKPKGPKSG ANATQGQQPK SSRPGAKAPF GQSGFKGKSE QGKAGHQGRG NKASSGRQHA
K