| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3668 |
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| Symbol | potE |
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| ID | 4254231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4379023 |
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| End bp | 4380342 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120310 |
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| Product | putrescine transporter |
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| Protein accession | YP_735788 |
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| Protein GI | 113971995 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAT CAGCAAATAA AATTGGTGTC GTCCAATTAA CTATTATCAC CATAGTCAAC
ATGATGGGTT CAGGTATTAT CATGTTGCCT ACCCAATTAG CCCAAGTCGG TACTATTTCT
ATCCTTTCTT GGTTAGTGAC TGCGGCGGGT TCTACAGCGC TTGCCTATGC CTTTGCCAAA
TGCGGTATGT TCAGTAAAAA ATCAGGTGGT ATGGGCGGTT ACGCCGAATA TGCCTTCGGT
CGTAGCGGTA ACTTTATGGC GAACTACACC TATGCGGTAT CGCTTTTAAT CGCTAACGTC
GCCATCGCTA TCTCTGCCGT GGGTTATGCC GCGGTGCTAC TCGAAGTGAA CTTAAGCCCA
ATGGCTATCT GTCTTGCCAC CATTGGCGTG CTTTGGTTAG CAACAGTGGC TAACTTTGGT
GGCGCCCGCA TTACGGGTCG CGTGAGTAGC GTTACCGTGT GGGGGATTAT TCTGCCCGTG
ATTGGTGTGT CGTTAATCGG TTGGTTCTGG TTCGATATCG ACCTCTACAA AGGTGCTTGG
AACCCACACG ATATGCCTTT CTTTAAAGCC TTAGGCGGTT CAATCGCGAT GACTCTATGG
GCATTCCTTG GCTTAGAATC AGCTTGTGCT AACTCGGAGA CAGTTGATAA CCCAGAGAAA
AACGTTCCTA TCGCCGTAAT GGGCGGTACC TTAGGTGCAG CGCTTATCTA TATCGTTTCA
ACCAACGTGA TTGCCGGTAT TGTGCCTAAC GCTGAACTTG CCAACTCAAA CGCACCTTTC
GGTCTAGCCT TTGCGCAAAT GTTTAACCCT GTGGTCGGTA AAATCGTGAT GGCCTGCGCC
ATTATCTCCT GTACTGGCTC ACTGCTGGGT TGGCAGTTCA CTATCGCGCA AGTGTTTAAA
GCCTCTGCCG ATGAAGGTTT CTTCCCTAAA GTATTCTCTA AGGTCAGTAA AGCCGATGCA
CCAATTTGGG GTATGACCAT CATCGTTTCG ATTCAAACCC TGCTGTCTTT GATGACTATC
AGCCCATCAC TGAGCAAACA GTTTGAAGCC CTGGTTAACC TCGCCGTGGT GACTAACATT
GTGCCTTACA TCCTGTCCAT GGCAGCCCTA GGTGTGATGC AAAAACAACT CAAAGTACCA
GCGAACAAGG CCCGTGTTGC CAACGTGATT GCGGTTATCG GCGCCCTGTA TAGCTTCTAC
GCCCTCTATA GCTCTGGTGA AACCGCAGTG ATGTTAGGCG CTATCGCGAC CTTCTTCGGT
TGGACCATCT ACGGGGTGAT TTCTAATAAA ACACCAACAG CTGAGATCAA AGCAGCGTGA
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| Protein sequence | MSKSANKIGV VQLTIITIVN MMGSGIIMLP TQLAQVGTIS ILSWLVTAAG STALAYAFAK
CGMFSKKSGG MGGYAEYAFG RSGNFMANYT YAVSLLIANV AIAISAVGYA AVLLEVNLSP
MAICLATIGV LWLATVANFG GARITGRVSS VTVWGIILPV IGVSLIGWFW FDIDLYKGAW
NPHDMPFFKA LGGSIAMTLW AFLGLESACA NSETVDNPEK NVPIAVMGGT LGAALIYIVS
TNVIAGIVPN AELANSNAPF GLAFAQMFNP VVGKIVMACA IISCTGSLLG WQFTIAQVFK
ASADEGFFPK VFSKVSKADA PIWGMTIIVS IQTLLSLMTI SPSLSKQFEA LVNLAVVTNI
VPYILSMAAL GVMQKQLKVP ANKARVANVI AVIGALYSFY ALYSSGETAV MLGAIATFFG
WTIYGVISNK TPTAEIKAA
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