| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3667 |
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| Symbol | |
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| ID | 4254230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4376775 |
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| End bp | 4378937 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638120309 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_735787 |
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| Protein GI | 113971994 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAT TAAAAGTTGC CGCCAGCTTA TCTGTTAGAT CATGTTTTGA AATAGACAGA
GAAGTCGTCA ATGTATTAAC CACAGATTTT TGCGATGTGG GTGCGGCTGT AGTCTCTGTT
GATGATGTTA GAAATGGTAT TGTTGAAAAA ATTAAAAATA CCGGATTGAA ACTGCCTATT
TTCGTATCAG TTTGTTGTGA AGAAACCTTC CCAGATGATA TTTGCTCTTC TATTACCGGG
GTATTTGAAC TCTGCGGTAG CAATACCGAT TTCTATGGCA AACAGGTCGA AACCGCCGTC
CAAAAATATG AGCAAGCCCT ATTACCGCCG TTCTTTGGCA CACTGAAAAA ATACGTGGAA
ATGGGCAACT CCACCTTCGC CTGCCCAGGC CATCAGGGTG GGCAATTCTT CCGTAAACAT
CCTGTGGGTC GCCAATTTTT CGATTTCTTT GGCGAAACCA TTTTCCGCTC CGATATGTGT
AATGCCGACG TTAAACTCGG CGATCTGTTA ATCCATGAAG GCGCGCCACT GGATGCACAA
AAATACGCGG CCAAAGTCTT TAACGCCGAT AAAACCTACT TTGTGCTCAA CGGAACTTCT
TCTTCAAATA AAGTGGCGAC CAACGCACTG CTGGCGAAGG GAGACTTGGT ATTATTCGAC
CGTAACAACC ATAAATCCAA CCACCATGGC GCGTTAATTC AAGCCGGTGC GACACCGATT
TATTTAGAAA CCGCCCGTAA CCCCTTCGGC TTTATTGGTG GCATCGACGC CCACTGCTTC
CAAGAGTCTT ATTTAAGGGA GCAGATCCGC GCCGTTGCAC CTGAGCGTGC CGATGAACAA
CGTCCATTCC GTTTAGCCAT TATCCAGCTG GGCACCTACG ATGGCACTAT CTACAACGCT
CGCCAAGTAG TTGATCGTAT TGGACATCTA TGTGATTACA TCCTGTTTGA CTCGGCTTGG
GTTGGCTATG AGCAATTTAT TCCTATGATG AATGACTGCT CGCCTCTGCT GCTCGAACTG
ACGCCTGAAG ATCCCGGTAT TATCGTGACT CAGTCAGTAC ACAAACAGCA GGCAGGCTTC
TCACAAACCT CGCAAATTCA CAAAAAAGAC TCACATATCA AAGGCCAAGC CAGATACTGC
AACCATAAAC GCTTCAACAA CGCCTTTATG ATGCACGCCT CTACCAGCCC CTTCTATCCG
CTGTTTGCCG CATTGGATGT GAACGCTAAA ATGCACGAAG GCGCCAGCGG CCGTTATCTG
TGGCGTGAGG CGGTTAAAGC CGGTATTGAA GCTCGCAAGT TACTGCTCAA AAAATGTAAA
TATATCAAGC CATTTATCCC AAGCATGATC GAGGGACGCC CATGGCAGGA TTATCCAACC
GAACAAATGG CCGATGATTT ACGTTTCTTC GAGTTTGAAC CCGGACAAAA ATGGCACTCC
TTCGACGGTT ACGAAAAAGG CCAATATTTC GTAGACCCTT GTAAGTTCCT ATTAACCACG
CCTGGTATCG ATGCCGAAAC GGGTAAATAT ACTGAGTTTG GTATTCCAGC AACTATTCTG
GCTAACTTCT TACGTGAAAA TAATATTATT CCCGAGAAGT GCGACTTAAA TTCGATTTTA
TTCCTGATGA CACCTGCGGA AGATATGGCG AAGATGCAAC ACTTAGTGTC GCAAATATCT
CGCTTCGAAA AATTAGTCGA CGAAGATGCG CCATTATCTG AAGTATTACC TAACGTCTAT
AACGCCAATA AAGCCCGTTA TAAAGACTAT ACCATTCGTC AACTCTGCCA AGAAATGCAC
AACCTTTATG TCAGCCATGA CGTAAAACAA CTGCAAAAAG AAATGTTCCG TCAGGCGCAT
TTCCCAACAA AAGTGATGGA CCCACAGGAA GCCAACCTCG AGTTTATCCG TGGCAAAGTG
GAGTTAGTAC CACTGTCACA AATTGAGGGA CGCATTGCCG CAGAAGGTGC ATTGCCTTAT
CCACCTGGAG TGTTATGTGT GGTCCCAGGT GAAATATGGG GTGGCGCTGT ACAACGTTAT
TTCTTAGCCC TTGAAGAAGG CATCAACTTA TTACCCGGAT TCTCCCCTGA ATTACAAGGT
GTTTACCTCG AAAACACCCC AGACGGAAAA ATCCAAGCCC TAGGTTATGT ATTAAATAAA
TAA
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| Protein sequence | MKSLKVAASL SVRSCFEIDR EVVNVLTTDF CDVGAAVVSV DDVRNGIVEK IKNTGLKLPI
FVSVCCEETF PDDICSSITG VFELCGSNTD FYGKQVETAV QKYEQALLPP FFGTLKKYVE
MGNSTFACPG HQGGQFFRKH PVGRQFFDFF GETIFRSDMC NADVKLGDLL IHEGAPLDAQ
KYAAKVFNAD KTYFVLNGTS SSNKVATNAL LAKGDLVLFD RNNHKSNHHG ALIQAGATPI
YLETARNPFG FIGGIDAHCF QESYLREQIR AVAPERADEQ RPFRLAIIQL GTYDGTIYNA
RQVVDRIGHL CDYILFDSAW VGYEQFIPMM NDCSPLLLEL TPEDPGIIVT QSVHKQQAGF
SQTSQIHKKD SHIKGQARYC NHKRFNNAFM MHASTSPFYP LFAALDVNAK MHEGASGRYL
WREAVKAGIE ARKLLLKKCK YIKPFIPSMI EGRPWQDYPT EQMADDLRFF EFEPGQKWHS
FDGYEKGQYF VDPCKFLLTT PGIDAETGKY TEFGIPATIL ANFLRENNII PEKCDLNSIL
FLMTPAEDMA KMQHLVSQIS RFEKLVDEDA PLSEVLPNVY NANKARYKDY TIRQLCQEMH
NLYVSHDVKQ LQKEMFRQAH FPTKVMDPQE ANLEFIRGKV ELVPLSQIEG RIAAEGALPY
PPGVLCVVPG EIWGGAVQRY FLALEEGINL LPGFSPELQG VYLENTPDGK IQALGYVLNK
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