Gene Shewmr4_3665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3665 
Symbol 
ID4254228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4375331 
End bp4375879 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content51% 
IMG OID638120307 
ProductPBP family phospholipid-binding protein 
Protein accessionYP_735785 
Protein GI113971992 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCATT TACATAAGTG GATAGTCGGA CTTGGGTTAT TAACGGCGGC ATTCAGCTCG 
GCGCAGGCCA TGACCTTATC GAGTAAAGAT ATTGGCGAAG GTCAGCAATT ATCGAATCAA
TTTGTTTTTA ATGGATTCGG CTGTAATGGC GAGAATCTTT CTCCCGAACT CACTTGGAGT
TATGCGCCAA AAGGCACAAA AGCCTATGCG GTGACGGCTT ATGATCCCGA TGCGCCAACG
GGTAGTGGTT GGTGGCATTG GGCCGTCTAC AATATTGGCG GCGAGCAACA ACAGTTAGCC
CAAGGTGCGG GCTCTAAAGC CAACGCCTTA CCTCAAGGAG CGATTGCGCT GAAGAATGAC
TTTGGCACTA CTGACTTTGG TGGCGCTTGT CCGCCGCAGG GGCATGGCAT GCACAGATAT
ATCTTTACTG TGTGGGCGCT ACCTTCACCA TTAGAGTTAC CTAAAGAGGC ATCTCCCGCG
CTGTTAGGCT TTATGCTCAA TGCGCAGGCC TTAGGTAGCG CTAAGCTGAC CGCTGTGTAT
CAGCGCTAA
 
Protein sequence
MMHLHKWIVG LGLLTAAFSS AQAMTLSSKD IGEGQQLSNQ FVFNGFGCNG ENLSPELTWS 
YAPKGTKAYA VTAYDPDAPT GSGWWHWAVY NIGGEQQQLA QGAGSKANAL PQGAIALKND
FGTTDFGGAC PPQGHGMHRY IFTVWALPSP LELPKEASPA LLGFMLNAQA LGSAKLTAVY
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